Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0307 ATGGTGAAATCGGCTTCTGAATTTTCCGTGGCTCCTTTTCTCAACAAGTGTTATGAAATGGTGGATGATCCTTTCACCGACGATATCATATCTTGGACCAAAACCAGTAACCACAGTTTTGTTATTTGGGATATGACCAAATTCTCCCTCACTCTTCTTCCGTCTTACTTCAAACACAACAATTTCTCCAGCTTCATTCGCCAACTCAATATCTATGGTTTCAGGAAAGTTGATACGGATTGCTGGGAATTTGCCAATGACAACTTTGTCAGAGGTCAAAAGCATTTGTTGAAGAATATTCGTAGAAGGAAACATCCACACATTGTAGATCAGCAAAAACCTTTGCCGCAGCTAGAAAATTCTGACAAACCATCATCACAAGAAGCAGCAAATCATGACCTTAGGAAAGATATTGAGAATCTAAAATCCGATAAAAATTCCCTTGTGCAGGAGTTTGTCAAACTTAGGAAGTGCCAGGAATCTGCTGAGAGTAAGATGCTGCTCCTCGGCGGTCGCCTTGAAGGAATGGAAGAGTGTCAGCAGCAGATGTTTTCATTCTTAGCCATGGTTGTGCAGAGCCCTGGGTTCATGGTTAAGTTGTTTCAGCCTCAGGAAAATAATTGGTGCAAGTCGGAACCAGGGAATATGCTGGACCAAGGTAAACAAGATGACTTTCCAGCTGTTTCTGATGGGACGATAATAAAGTATGAACCACCCGTAGGTGAAAAACGGAAGCCTATAGCTCCTCTATCTCCTCGTTTTGTTAAACAACCAGAGCCTGAGATTTTTGCAGATGGGTTAAAAGACTACTGCATCAGTTCAGAATTCTTGAAAGTGCTCATGGATGAAAAACTGTCTCCCTTGGATAACCATTCTCCATTTCTTCTACCAGATTTACCTGATGATGGTTCTTGGGAACAGCTTTTCCGAGGTAGCCCGATCCTGGAAAACATTGACGATTTTAATCAGGAAAGTAAGGAGCCAACTGCTAGTGGAATGGATATAGAAACTACTATGTCCGAAACTTCAAACGAAGAATCTCAAACTTTTGAGTCATTGATTGAAGAATTGGAGAAAACTCAAAAGAGTAGGTTGGAATTATGTTCTGATGGCGTACATCTGGAGGAGCTGCAGAGTTTGGAATCTCTAACTGAGCAAATTGAACTTTTACTTTCTGAAACTGACAATGATGAGGAAGGAACTAGGAAGTGA 1212 0.4117 MVKSASEFSVAPFLNKCYEMVDDPFTDDIISWTKTSNHSFVIWDMTKFSLTLLPSYFKHNNFSSFIRQLNIYGFRKVDTDCWEFANDNFVRGQKHLLKNIRRRKHPHIVDQQKPLPQLENSDKPSSQEAANHDLRKDIENLKSDKNSLVQEFVKLRKCQESAESKMLLLGGRLEGMEECQQQMFSFLAMVVQSPGFMVKLFQPQENNWCKSEPGNMLDQGKQDDFPAVSDGTIIKYEPPVGEKRKPIAPLSPRFVKQPEPEIFADGLKDYCISSEFLKVLMDEKLSPLDNHSPFLLPDLPDDGSWEQLFRGSPILENIDDFNQESKEPTASGMDIETTMSETSNEESQTFESLIEELEKTQKSRLELCSDGVHLEELQSLESLTEQIELLLSETDNDEEGTRK* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0307 403 MobiDBLite consensus disorder prediction 111 130 - -
Lan18g0307 403 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 346 IPR027725 -
Lan18g0307 403 Gene3D - 5 104 IPR036388 -
Lan18g0307 403 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Lan18g0307 403 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan18g0307 403 SMART hsfneu3 9 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan18g0307 403 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-8 1 346 - -
Lan18g0307 403 Coils Coil 131 151 - -
Lan18g0307 403 Pfam HSF-type DNA-binding 13 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan18g0307 403 PRINTS Heat shock factor (HSF) domain signature 13 36 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan18g0307 403 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan18g0307 403 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0307 Lan-Chr18 5308027 5311615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0307 10 392 HSF AT1G67970 41.282 1.95e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lan18g0307 HSF_DNA-bind 5.6e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0307 K09419 - gmx:100813694 504.982