Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0297 ATGTTCAGAAGTACAAAATTAGGAAACCCAAGAACATTTCATTATTTGAATCAATCAAATTGCTTTGAGTTGGAAGGGCTTGATGAGTCTAAACAATATCATGATACAAGGAGAGCAATGGGTGTTGTTGGAATAAACTCTGAGGAACAGGAAGCAATATTTCGCGTGGTTGCTGCAATTTTGCACCTTGGCAACATTGAATTTACAAAAGGGATGGAAATGGACTCATCTATGCCGAAAGATGAAAAATCTCGGTTCCACCTTCAAACAGCTGCTGAACTTTTCATGTGTAATCCGAAAGTATTTGAAGATTCTCTTTGCGAACGTGTAATTGTCACTCGTGATGAAACTATTACAAAATGTCTGGATCCAGAGGCTGCTGCTCTAAGCCGAGATGCTTTGGCTAAGATTGTGTACACAAGGTTGTTTGACTGGCTGGTGCATAAAATTAATAGTTCAATTGGTAAAGACCCTGAGTCAAAGTCCTTAATTGGCGTGCTGGATATTTCTGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAACAATTCTGTATTAATTTGACAAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAATGAGGAGATTGATTGGAGTTACATTGAGTTTTTTGACAATCAAGATATTATTAATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTAGATGAAGCATGTATGTTTCCTAGATCAACTCATGAAACGTTTGCCCAAAAGCTGCATCAAACATTCAAAAACCATAAAAGGTTCAGCAAGCCCAAATTGGCACATAGTGACTTCACAATTGGCCATTATGCTGGTGATGTCACTTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCAAAACACCAAGCTCTTCTTTACACTTCCAATTGCCCCTTCATTTCGGGTTTGTTTCCCCCCTCACCTGATGAACCGTCCAAACAGTCAAAGTTTTCTTCAATAGGTACCCAATATAAGGAACAATTGATATCACTACTTGATACTATCAGTGCCACTGAGCCACACTACATTCGTTGTGGAGTTATGGAAGCAATTAGGATAAGCTTTGCTGGGTTTCCGACTAGAAAACCCTTTGATGAGTTTCTGGATCGATTTGGGCTTCTCATACCTGAAGCTCTGGATGGAAGATCTGATGAGGTCACTGCTTGCAAAAGAATTCTGGAGAAGATTGGAAATAAAGGCTATCAGATTGGTAAAACAAAGGTTTTTCTTCGAGCTGGTCAAATGGCAGAACTAGAGACACGAAGAAGTGAGGTCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAGTTAGTTCCTATTTAGCTCACAGAAGCTTTGTCTTGCTTCGTTTGTCTGCTAGACAGATTCAAGCTGCATGCAGAGGACATCTTGCTCGACAAGTTTATGAGGGATTGCGATGGGAGGCTTCTAGTCTGATGATTCAGAGGTATTTCCGCATGCATATTGCTAGGAAGGCATACACTGAATTGTATAGCTCTGCTGTTTCTATTCAGACTGGTATGCAAGGGTTGGCTGCTGGCTGTGACCTACGCTTTAGGAAGCAGACAAGTGCAGCTATTGTCATTCAGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTGGAAAAGCAAGTTGAAGATCTTACATTGAGGTTGCAGCTGGAAAAATGCATGCGGCTTGATATGGAAGTAACAAAATCAAAAGAAAACCAAAGATTACAGTCTGCTTTGCAAGAGATGCATCTTCAGTTTAAGGAAACTAAAATACTTCTTCAAAAGGAGCGTGAGGCTGCAGAAAGAGTCCCTGTCATACAGGAGGTTCCTGTTGTTGACAATGCTTTGTTGGAGAAGCTTACTAGTGAAAACAAGAAACTCAAGACCTTGGTGTCTTATCTTGAAAGGAAAATTGATGAAACAGAAAAAAGATATGAAGAGGCAAGCAAAATTAGTGAAGAAAATTTGATAACTGCTATGCAAAGGCTTGAAGAGAATTTCTCAGATATTGAATCTGAAAACCAGGTTCTTCGCCAACAACCTTTGCTCAACTCATCTGTGAAAATGATGTCACAACCTCTTTCTAGCCAAGTTTCAGAGAAGTTGGAAAATGGTCACCATGTGGCCGAAGAGCAGAAAGCTGTGGAGATTGTCACACCTGAGAAAAAATTTGAAACTGAATCTGATAGCACATTGAGGAGATCCTACATTGAACTCCAACATGAGAATGTTGATGCTCTTGTTAACTGTGTTATGAAAAATGTTGGCTTCTATCATGGAAAACCTGTTGCTGTATTTACCATTTATATATGTCTTCTCCATTGGAAATTATTTGAAGCTGAAAGGACAAGTGTATTTGATCGCCTTATCCAGATGATTGGTTTTGCAATTGAGAATGAAGATGACAATGATCTTATGGCCTATTGGCTATCAAATACGTCTGTGCTATTGTTTTTGCTTCAACAAAGTCTGACATCTGGCGGTTCAACTGATGCAATCCCAGTTAGAAAACCACCTAATCCAACATCCCTCTTTGGAAGAATGACAAAGGGTTTTCGTTCATCCCCTTCTTCTGCCAACCTTCCTGTCCCATCATTAGATGTTGTACACAAGGTAGAGGCTAAATACCCTGCTTTGCTCTTCAAGCAGCAGCTCGCAGCCTATGTGGAGAAAATATACGGCACCCTTCGGGACAACTTGAAAAAGGAGTTAGCATTTTTGCTTTCATTATGTATCCAGGCACCAAGTACATCAAAGGGAGTGTTAAAATCTACCCAGTCCTTTGATAAAGATTCTCCCATGGGTCACTGGCAAAGTATAATTGAATCCCTCAACACCCTCCTCTGTACTCTGAAAGAAAACTTTGTGCCTCCAATCCTTATCCGTAGGATCTTCACTCAAACATTCTCATATATTAATGTTCAACTCCTCAATAGTCTTCTTCTGCGTCGTGAATGTTGCACATTCAGCAATGGGGAATATGTCAGAGATGGTTTAGCAGAATTGGAGCTGTGGTGCACCCAAGCAAAGGGGGAGTATGCCGGGTCATCTCAGGATGAGCTTAAGCACATAAGAGAAGCTGTTGGATTATTGGTTATTCATCAGAAGTATAGGATTTCCTATGAAGAAATCATTAATGATTTATGCCCTGTCATGAGTGTCCAGCAGCTGTATAGAATATGTACACTTTACTGGGATGATATTTACAATACTCCAAGTGTATCCCCAGATGTCCTTTCATGCATGAGGGTACTTATGGCTGAGGATTCTAACAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAATTCCAGCAGCATCCCCTTCTCAGTGGATGACCTCTCTACATCACTGCAAGTCAAAGATTTCTCAGATATGAAAACAGCTCATGACCTTCTCCACAATCATGCCTTCCCATTTTTAAACAAGGAAGCTTAG 3501 0.4002 MFRSTKLGNPRTFHYLNQSNCFELEGLDESKQYHDTRRAMGVVGINSEEQEAIFRVVAAILHLGNIEFTKGMEMDSSMPKDEKSRFHLQTAAELFMCNPKVFEDSLCERVIVTRDETITKCLDPEAAALSRDALAKIVYTRLFDWLVHKINSSIGKDPESKSLIGVLDISGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKNEEIDWSYIEFFDNQDIINLIEKKPGGIIALLDEACMFPRSTHETFAQKLHQTFKNHKRFSKPKLAHSDFTIGHYAGDVTYQTELFLDKNKDYVVAKHQALLYTSNCPFISGLFPPSPDEPSKQSKFSSIGTQYKEQLISLLDTISATEPHYIRCGVMEAIRISFAGFPTRKPFDEFLDRFGLLIPEALDGRSDEVTACKRILEKIGNKGYQIGKTKVFLRAGQMAELETRRSEVLGKSASIIQRKVSSYLAHRSFVLLRLSARQIQAACRGHLARQVYEGLRWEASSLMIQRYFRMHIARKAYTELYSSAVSIQTGMQGLAAGCDLRFRKQTSAAIVIQAARETGALQAAKNKLEKQVEDLTLRLQLEKCMRLDMEVTKSKENQRLQSALQEMHLQFKETKILLQKEREAAERVPVIQEVPVVDNALLEKLTSENKKLKTLVSYLERKIDETEKRYEEASKISEENLITAMQRLEENFSDIESENQVLRQQPLLNSSVKMMSQPLSSQVSEKLENGHHVAEEQKAVEIVTPEKKFETESDSTLRRSYIELQHENVDALVNCVMKNVGFYHGKPVAVFTIYICLLHWKLFEAERTSVFDRLIQMIGFAIENEDDNDLMAYWLSNTSVLLFLLQQSLTSGGSTDAIPVRKPPNPTSLFGRMTKGFRSSPSSANLPVPSLDVVHKVEAKYPALLFKQQLAAYVEKIYGTLRDNLKKELAFLLSLCIQAPSTSKGVLKSTQSFDKDSPMGHWQSIIESLNTLLCTLKENFVPPILIRRIFTQTFSYINVQLLNSLLLRRECCTFSNGEYVRDGLAELELWCTQAKGEYAGSSQDELKHIREAVGLLVIHQKYRISYEEIINDLCPVMSVQQLYRICTLYWDDIYNTPSVSPDVLSCMRVLMAEDSNNAQSDSFLLDDNSSSIPFSVDDLSTSLQVKDFSDMKTAHDLLHNHAFPFLNKEA* 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0297 1166 Gene3D - 2 44 - -
Lan18g0297 1166 ProSiteProfiles IQ motif profile. 494 522 IPR000048 GO:0005515
Lan18g0297 1166 Gene3D - 494 547 - -
Lan18g0297 1166 Gene3D - 444 493 - -
Lan18g0297 1166 SMART iq_5 492 514 IPR000048 GO:0005515
Lan18g0297 1166 SMART iq_5 467 489 IPR000048 GO:0005515
Lan18g0297 1166 ProSiteProfiles Myosin motor domain profile. 365 442 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan18g0297 1166 Coils Coil 638 672 - -
Lan18g0297 1166 ProSiteProfiles Myosin motor domain profile. 1 364 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan18g0297 1166 Gene3D - 180 357 - -
Lan18g0297 1166 CDD MyosinXI_CBD 759 1133 IPR037975 GO:0007015
Lan18g0297 1166 Gene3D Myosin VI head, motor domain, U50 subdomain 46 179 - -
Lan18g0297 1166 SMART MYSc_2a 1 443 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan18g0297 1166 Pfam IQ calmodulin-binding motif 496 513 IPR000048 GO:0005515
Lan18g0297 1166 Pfam IQ calmodulin-binding motif 472 488 IPR000048 GO:0005515
Lan18g0297 1166 Pfam Myosin head (motor domain) 5 364 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan18g0297 1166 Pfam Myosin head (motor domain) 365 430 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan18g0297 1166 Gene3D - 376 443 - -
Lan18g0297 1166 Coils Coil 674 701 - -
Lan18g0297 1166 Pfam DIL domain 985 1088 IPR002710 -
Lan18g0297 1166 SMART DIL_2 984 1091 IPR002710 -
Lan18g0297 1166 ProSiteProfiles IQ motif profile. 468 497 IPR000048 GO:0005515
Lan18g0297 1166 PANTHER MYOSIN 550 1162 - -
Lan18g0297 1166 PANTHER MYOSIN 5 364 - -
Lan18g0297 1166 PANTHER MYOSIN 365 550 - -
Lan18g0297 1166 PANTHER MYOSIN-6 5 364 - -
Lan18g0297 1166 PANTHER MYOSIN-6 365 550 - -
Lan18g0297 1166 PANTHER MYOSIN-6 550 1162 - -
Lan18g0297 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 495 IPR027417 -
Lan18g0297 1166 ProSiteProfiles Dilute domain profile. 808 1109 IPR002710 -
Lan18g0297 1166 Coils Coil 554 581 - -
Lan18g0297 1166 PRINTS Myosin heavy chain signature 163 191 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan18g0297 1166 PRINTS Myosin heavy chain signature 216 244 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0297 Lan-Chr18 5084508 5103436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0297 6 1163 Myosins gene family AT5G43900 63.826 0.0 1558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0297 K10357 - gmx:100786893 1767.67