Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0292 ATGGAGTTGAGCTTGGATCTTAGTTTGGCCTTTGTCCCAAGAACCATTTCTGAGCTTCTGAGTAATGTTTCTGCTGAAATCAAAGATGGGTCTTACAAAATGGCTATGCTTGATTACTATGTCAAAAGATTGGAAGATGAAATGAGAAAGATTGAGGCCTTCAAGCGTGAGCTTCCTCATTGCATGCTTCTAGTAAACCAAGCTATAACTATATTGAAGGAGGAAATAGACCATTGTATGAAAATGCAAAATCAACCTGTTGAAGATTTCATGCCACTGAAAGTTAAATATAATTCTGGAAGAAAAGGGTCATTGACTATTGGGAAGGAAACTTGTGACAAAAAGAACTGGATGAGTTCTGTTCAGTTATGGAGTGATGAAACCAAATTGGGGACTGAAGAAGGGTCTATGCCAAAGAACAAGACCAACAGTGAAGGAGCATTTATAGCTTACAATGGAAACTCATTAACGCAAAAAACAGTGATGAAAAGGGATAACAAGGAGGTTTCTGTTTCACAGGCTCCTAGGCTTAGTTTGTTGACTCCAATGTTTGAAATGAATCATGAGAATTCCAATAGTGGCTGTGGAGGAAGTTCTGATTCTTCTTTTGTTACAAGCCTGGTTGAGATAAAGGGTAGACAACCACAACCTCAGCAGAATCCAAGAAAACAAAGGCGATGCTGGTCAAAAGAACTCCATCGAAGTTTTGTTGATGCACTTCAACAACTTGGTGGAACACAAGTGGCCACTCCTAAGCAGATTAGAGAACTGATGCAGGTGGAAGGTCTGACAAATGATGAAGTGAAGAGCCATCTGCAAAAGTACAGGCTTCATGTTAAAAGACTACCAGTTTCTTCAGTTGGCCAGGCTAATAATGATTTATGGATAGCACAAGATCAATATGGAGAAAAATCAAAGGGAAACTTTTCATCACAGTCTGGTTCCCCACAAGGTCCTCTCACCCTAAGAGGATATGCAAAATGTCTTTCTAGCTCTGGACTCAAGAGTTCGGATGCAGAAGAAGATGTGCAATCAGATTGCCACAGTTGGAAAACTGGACTACACCAATATCCAGAACATGATGCATTGTGA 1092 0.4011 MELSLDLSLAFVPRTISELLSNVSAEIKDGSYKMAMLDYYVKRLEDEMRKIEAFKRELPHCMLLVNQAITILKEEIDHCMKMQNQPVEDFMPLKVKYNSGRKGSLTIGKETCDKKNWMSSVQLWSDETKLGTEEGSMPKNKTNSEGAFIAYNGNSLTQKTVMKRDNKEVSVSQAPRLSLLTPMFEMNHENSNSGCGGSSDSSFVTSLVEIKGRQPQPQQNPRKQRRCWSKELHRSFVDALQQLGGTQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVKRLPVSSVGQANNDLWIAQDQYGEKSKGNFSSQSGSPQGPLTLRGYAKCLSSSGLKSSDAEEDVQSDCHSWKTGLHQYPEHDAL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0292 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 356 IPR044787 GO:0003700|GO:0006355
Lan18g0292 363 Gene3D - 222 279 - -
Lan18g0292 363 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 223 278 IPR006447 GO:0003677
Lan18g0292 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 220 280 IPR017930 -
Lan18g0292 363 SUPERFAMILY Homeodomain-like 221 281 IPR009057 -
Lan18g0292 363 Pfam Myb-like DNA-binding domain 225 276 IPR001005 -
Lan18g0292 363 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0292 Lan-Chr18 4662258 4685392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0292 1 281 G2-like Transcription Factor Family AT2G03500 37.908 6.86e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan18g0292 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0292 - - lang:109332341 716.842