Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0285 ATGCAGGATGTTGAAGTAAATATGATCATAACAGATTACTGTATCCCAGGAATGACTGACTATGATATTCTGAGAAAAATCAAGGAATCTAAGTCTCTTAAAGACATACCAGTTGTGATTATATCCTCAGATGATATTTCATCAAGACTCAACAGATGCTTGGAAGAGGGGGCTGAAGAATTCTTTCCGAAACCAGTTCAACAATCAGATGTGAACAAACTCAAGCCTCATTTATTGAAATCAAGAGTTAAGAAAGAGCAAGACAAACCCATCAACAACAAAAGGAAGGGCATGGAAGAAAGTTACTCACCAAATAAAAACAGACAAAAATGTAGTACTTAA 342 0.3538 MQDVEVNMIITDYCIPGMTDYDILRKIKESKSLKDIPVVIISSDDISSRLNRCLEEGAEEFFPKPVQQSDVNKLKPHLLKSRVKKEQDKPINNKRKGMEESYSPNKNRQKCST* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0285 113 Pfam Response regulator receiver domain 5 71 IPR001789 GO:0000160
Lan18g0285 113 MobiDBLite consensus disorder prediction 65 113 - -
Lan18g0285 113 SUPERFAMILY CheY-like 4 80 IPR011006 -
Lan18g0285 113 ProSiteProfiles Response regulatory domain profile. 1 79 IPR001789 GO:0000160
Lan18g0285 113 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 109 IPR045279 GO:0009736
Lan18g0285 113 MobiDBLite consensus disorder prediction 75 103 - -
Lan18g0285 113 Gene3D - 1 111 - -
Lan18g0285 113 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0285 Lan-Chr18 4466234 4467381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0285 2 91 Response Regulator Gene Family AT2G41310 61.111 2.06e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan18g0285 Response_reg 6.6e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0285 K14492 - gmx:100787436 171.014