Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0276 ATGGCTGAGCTACATGGCTCAGAAACAGACACAAGTACGAACTCTACTACTTCACCATTGCCATCAACTTTCACTATCACTAAACCCAATACATCATTCCCCGACCCGCTTCAGAAAAACCAGAAGAAAAGGCCCAGAGACAACAGTAGCAAGCACCCGGTTTACAGAGGGGTTCGAATGCGTGCATGGGGAAAATGGGTATCCGAAATCCGCGAGCCGAGGAAGAAAAACCGGATCTGGCTCGGAACCTTCGCAACTCCTGAGATGGCGGCTCGTGCGCACGACGCGGCGGCGATGGTGATCAAAGGCGGTTCAGCCATTCTCAACTTCCCAGAAATCGCCGGATCGTTGCTGCGGCCAGATTCCAACTCGCCACGTGACGTTCAAGCCGCTGCTGCTAAAGCTGCTGCCATGGAAGTTTTGGAATCCCAAACGACGTTGCATTTATCGTCTTCTTGTGCTTCTTTGAGATCATCAAATTCTTTTTGTAGGTCCAGTGAGGAAGAGTTGGGTAAGATAGTGGAACTCCCACATTTGGGTACTAGTTTTGAATCACTCGACCTTGGTAATAATGAGTTGGTGTTTTTTGACACTGTTGAAGGGTGGCCTTATTCTCACCCATGGTATCATAACATTTATGATGGTGGGGATAACATTTCAGTGCAAGACTATTACTCAGAGAGTGTGATGCTTTGTGGCTTTGAAGGTTCTTTTTGGGAACATTAA 726 0.4766 MAELHGSETDTSTNSTTSPLPSTFTITKPNTSFPDPLQKNQKKRPRDNSSKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDAAAMVIKGGSAILNFPEIAGSLLRPDSNSPRDVQAAAAKAAAMEVLESQTTLHLSSSCASLRSSNSFCRSSEEELGKIVELPHLGTSFESLDLGNNELVFFDTVEGWPYSHPWYHNIYDGGDNISVQDYYSESVMLCGFEGSFWEH* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0276 241 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Lan18g0276 241 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Lan18g0276 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 236 - -
Lan18g0276 241 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Lan18g0276 241 CDD AP2 55 112 IPR001471 GO:0003700|GO:0006355
Lan18g0276 241 MobiDBLite consensus disorder prediction 39 54 - -
Lan18g0276 241 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Lan18g0276 241 MobiDBLite consensus disorder prediction 1 38 - -
Lan18g0276 241 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Lan18g0276 241 Gene3D AP2/ERF domain 54 113 IPR036955 GO:0003700|GO:0006355
Lan18g0276 241 MobiDBLite consensus disorder prediction 1 55 - -
Lan18g0276 241 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 13 236 - -
Lan18g0276 241 SUPERFAMILY DNA-binding domain 54 111 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0276 Lan-Chr18 4235380 4236300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0276 39 213 AP2-EREBP Transcription Factor Family AT5G25810 55.556 4.60e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan18g0276 AP2 9.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0276 K09286 - gmx:100778201 241.506