Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0273 ATGACTGACTCCAAGTCAACTGGTAAGGTAATTAAGAAACAAGACTCCAAAAAAATTTCCAGTCTCAGCTATCAGCCTCCTAGGAAGCAAAACCGCAAGGGTGAAAACCCCACACGCCTGATATCTACTCTTGACCAGTCTTCTGATTTTGGACGTTCAAACTCTTGGATCTGTAAAAATTCTGCTTGTAGGGCAGTTCTATCTATAGATGACACATTTTGTAGAAGGTGCTCTTGCTGTATCTGTCATCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTATGCACATCTGAATCTACTCAAGGGGACTCCTGTGGGTTGTCTTGCCATATTGAGTGTGCCCTCGAACGTGAAAAAGTTGGAGTTATTGATCATGGGCAACTGATTCAGCTAGATGGTGGTTATTGTTGTGCATCTTGTGGTAAAGTTACAGGGATACTTGGATGCTGGAAAAAGCAACTAAATATAGCAAAAGAGGCCCGGCGTGTAGATGTACTCAGTTATAGGATATATTTGTGCTACAGGCTGCTGGACAGGACATCAAAATTTAAAGAATTGCATCAAATTGTACAAGAGGCTAAGGTTAAACTGGAGACAGAAGTTGGTCCAGTTAATGGTGTTTCTGTGAAGATGGCACGGGGTATTGTCAGCAGGCTCTCTATTGCCAGTGATGTGCAGAAACTATGCTCTCTTGCTATTGAGAAAGCTGATAGCTGGCTGACTACTGTTCAGAATGTAAATACAGATTCCAGAGAGGGTTCACTTCCTGCTGCTTGCAAGTTTGTTTTTGAAGAGGTGACAGCTTCCTCAGTAAAAATCATCTTAATTGAAATATCAAATGTATCTTCTGAGGGCATTAAGGGATACAAGCTCTGGTATTACAAGAGTGGGGAGGAATTGCACACAAAGGAGCCTGTTTCTGTATTCCCCAAATCTCAAAGGAGGATTTTGATATCCAACCTTCAGCCTTGCACTGAATATACTTTTCGGATTATATCTTATACTGATTCGAATGACCTGGGCCATTCTGAGACTAAGTGTTTCACCAAGAGCATCGAGATAATTCAAAAGAACCCCTCTTCCTCTGTTGTGATGAATCAAAGAAAATATAACCTTCAAACTAGAGGCAGTTCTTCTGGCTCCAAAGTGGAGCTCCATCCGACAATGGAAGACTCTGGATTTAAGGTTCGAGACCTTGGGAAAATTTTGCGTCTTGCTTGGGCTAAAGAACAAGCTTGCTTTGAGGAGTTTTGTTGTGCTGATAAGAAAATTTGCGGTGGAGAAAATGAGATGGTTAAGCCAAAAACTCCACAAGAGAAGTTGCCTACAGTTTCACGAGACCTTGATTTAAATGTTGCATCAGTTCCTGATTTAAATGAAGAGCTAACACCTCCTTTTGAGTCTTCCAGGGATGAAGATAATGGTTGCTCTTCCCTGCAGGCGGTTGAGGCAGATGATGATGCTGCTTCTCTTGATATAGAGAAAAATGGTTTAGCAAGATCACATGGGAGTGGTGACTCACAAACCTGGGCACGTGGTCCTGCCGGAGAAGTGGCAGCTGTTGATTCTCGCCTAGATATATGTAGGAAAAGGCTAGCAAGCAGAAACGAAGAGACACATGATTGTGACAGCACTTTGATAAATGACTCTCCTTTATGCAGATCTGATGGATCAATCACTTTGGATGAGAACTTTGAGTATTGTGTGAAAGTTATTCGCTGGCTAGAATGTGATGGTCACATCAAACAGGAATTTAGGTTGAAGTTGTTAACATGGTTTAGTTTGAGGTCGACGGAGCAAGAGCGCAGGGTAGTTAATACCTTCATTCAAACTCTTATTGATGATCCAAGTAGTTTGGCAGGGCAACTGGTTGACTCTTTCTCTGATATTATTTCCAACAAGAGGCCAAGAAATGTATTCTGCAATAAGGCTGTGACATCAAATTAA 1953 0.4163 MTDSKSTGKVIKKQDSKKISSLSYQPPRKQNRKGENPTRLISTLDQSSDFGRSNSWICKNSACRAVLSIDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESTQGDSCGLSCHIECALEREKVGVIDHGQLIQLDGGYCCASCGKVTGILGCWKKQLNIAKEARRVDVLSYRIYLCYRLLDRTSKFKELHQIVQEAKVKLETEVGPVNGVSVKMARGIVSRLSIASDVQKLCSLAIEKADSWLTTVQNVNTDSREGSLPAACKFVFEEVTASSVKIILIEISNVSSEGIKGYKLWYYKSGEELHTKEPVSVFPKSQRRILISNLQPCTEYTFRIISYTDSNDLGHSETKCFTKSIEIIQKNPSSSVVMNQRKYNLQTRGSSSGSKVELHPTMEDSGFKVRDLGKILRLAWAKEQACFEEFCCADKKICGGENEMVKPKTPQEKLPTVSRDLDLNVASVPDLNEELTPPFESSRDEDNGCSSLQAVEADDDAASLDIEKNGLARSHGSGDSQTWARGPAGEVAAVDSRLDICRKRLASRNEETHDCDSTLINDSPLCRSDGSITLDENFEYCVKVIRWLECDGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNVFCNKAVTSN* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0273 650 SUPERFAMILY Fibronectin type III 265 340 IPR036116 GO:0005515
Lan18g0273 650 PANTHER VIN3-LIKE PROTEIN 1 4 646 - -
Lan18g0273 650 Pfam PHD - plant homeodomain finger protein 58 175 IPR032881 -
Lan18g0273 650 Gene3D Immunoglobulins 242 348 IPR013783 -
Lan18g0273 650 MobiDBLite consensus disorder prediction 1 16 - -
Lan18g0273 650 MobiDBLite consensus disorder prediction 1 38 - -
Lan18g0273 650 MobiDBLite consensus disorder prediction 17 38 - -
Lan18g0273 650 ProSiteProfiles Fibronectin type-III domain profile. 257 356 IPR003961 GO:0005515
Lan18g0273 650 PANTHER VIN3-LIKE PROTEIN 2-RELATED 4 646 IPR044514 GO:0010048|GO:0040029
Lan18g0273 650 CDD FN3 262 346 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0273 Lan-Chr18 4003869 4010793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0273 54 640 PHD Gene Family AT3G24440 47.934 2.98e-170 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0273 - - gsj:114418583 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0273 18 4003869 4010793 Lan6g2245 6 32706292 32713595 LSH
Lan18g0273 18 4003869 4010793 Lan10g0405 10 2833643 2840751 PCT
Lan10g0405 10 2833643 2840751 Lan18g0273 18 4003869 4010793 PCT