Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0258 ATGAACTCTCATCATTTTACCTTCATTCTGTTACTCTCTTTATTCACTGCAAAAGTGATCACAATTCAACTCAATGAATATGAATCTCACACATCAAGAAGAATCTTACACCAGCCGTTATTCCCGGTCAGTTCTGCTCTGCCGCCAACCACCGACTCACCACCGCTGCCACCACCACCAGATACTCCTTCCTCTCCGGACATTCCTTTTTTTAACGAGTATCCAACAGCTCCACCGCCGCCTCAGCCGGAGCAGCAACTGCCGTCAACCCCCGCCGGCGCAATCGCGACGAATCCAACGGGAATGCAACAAACGAAGCCGACGAAGAAAGTAGCAATCGCAATATCCGTCGGAATCGTAACACTAGGGATGTTATCTGCACTCGCGTTCTTCTTATATAAGTACAGAACAAAGCACAGTGTGGAAACAATTCAGAAAGAAAAGAAACTAGTGCGTGAAAATTCCAATTATGTCCCTGAGACTTCTAATAATTCTTCGCAACCACCACCACAGTCTAGTTTCCTCTACATTGGGACGGTTGAACCGAACCGGACATCGTTAAGTGAACCGGACCGAACCGGAAACGTTGGCAACCGGTCACTTTTTCGTAAACTCGATAATTCAGTTAAGCTTTCGGATCGGTACCGTCCCAGCCCTGAATTGCAGCCACTGCCGCCGTTGAATAAACCTTCCGATAATGAGAATCACCTGCCGCCGGCGGCATCCTCGTCTTCCTCTTCCGACGAAGAAAGCCGCGTTAGGAGGTTTCATTCGCCGTCGCTCAGTCATGAGGAGGATAGCTATTATTGTACGCCGGTGTCGTCCCGTCATAGCTATCGGGATAATGGTAACACTTCGGCGGCGTTGGTTACCGGAGCTCCGGTGGTTCCTTTCTCGAAGAGAACCTCGCCGAAATCTAGGCTTTTAGCTTCATCGCCGGATAGGAGGAACATCATGATACCGTCAATAAAAAATTCTTCTCAGCCACCGTCAATATCTCCGGCGCCACCACCACTGCAACCTAGAAGGCCGAAATTCTTAGAGCCTCCACCAGCACTGGATTTGAGGCATCTTCATTCAGACGAGTCCATGACATCACTTCATCTTCCACCACCTCCGCCACCACCACCGCCACTGCCACCATCACGACGAGCAATGCCTCGGCGAAAGGTTTGGTCTCCGGTCAGAAGCACGATCTCATCTATTGCTGCCTCGAGAAAGCAGCAACAGTCTTGGTCTCCAAGTCAAGAAGGAGCAGCTTCTGCTTATTCTACTAACAGTGTCACAAAAGCAGCATCAGTGGAAACTGATGATATGGATGAAGGGAAACCTAAGTTGAAGGCTTTACATTGGGATAAAGTGCGTGCAACCTCAGACTGCGCCACCGTGTGGGACCAGTTAAAATCAAGCTCCTTTCAGTTAAATGAGGACATGATGGAGAGTCTGTTTGGTTGCAATTCGACAAATTCTGCACCAAAAGAGACTGTTACTAGAAAGTCAGTGCTTCCTCCTGTTGAGCATGAGAATAGGGTGTTAGACCCCAAGAAATCACAAAACATAGCAATACTCTTGAGGGCACTGAATGTGACCAGAGATGAGGTGTCTGAAGCTCTTCTAGATGGGAATCCCGAAAGCTTGGGTGCTGAGCTATTGGAAACTCTTGTAAAGATGGCTCCAACTAAGGAGGAAGAGATAAAACTTAAAAACTATGATGGCGACCTCTCAAAACTTGGGTCAGCCGAAAGATTTCTTAAAACAGTGCTTGATATCCCTTTAGCCTTTAAAAGAGTTGAAGCCATGCTTTATAGAGCTAATTTTGAAGCAGAAGTTAACTACCTTAGGAAGTCTTTTCAAACCCTGGAGGTAGCAAGCGAGGAATTAAAGAATAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGCACCAATCGCGGCGATGCTAAATCTTTCAAACTTGAAACACTCCTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACACTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTTCAGGTGGGGAATCTGCAAATGAGAATTCTCAGAACCAAACGAGTTCCGAATTCAATGAAGATGAGTTCAAAAAGAAAGGATTGCAGGTTGTAGCTGGACTGAGTAAAGACCTTGGTAATGTAAAAAAAGCAGCAGGAATGGACTCAGATGTCTTAAGCAGTTATCTCTTGAAGCTTGAAATGGGGCTTGATAAAGTGAGATTGGTTTTGCAATATCAGAATCCAGATATGCAAGAGAATTTCTTTAACTCGACAAACATATTTCTGAATGATGCCGAAGAGAAAATTGCTAGGATCAAGGCTGATGAGAAAAAGGCCTTATTCCTTGTGAAAGAAATTACAGAATACTTTCATGGAGATACAGCAAAGGAAGAAGCACACCCTTTCAGAGTTTTTATGATTGTAAGAGACTTTCTAAATATCTTGGATCAAGTCTGCAAAGAAGTTGGAAGGATACAAGACAAAACTGTGATTGGTTCAGACAGATCTTTCCAGATAGCTGCAAGTGCATCGTTACCTGTTCTCAGCAGGTACCATGGAAGACAAGATAGAAGTTCAGACGAAGAAAGCTTGTCTCCCTAG 2658 0.4518 MNSHHFTFILLLSLFTAKVITIQLNEYESHTSRRILHQPLFPVSSALPPTTDSPPLPPPPDTPSSPDIPFFNEYPTAPPPPQPEQQLPSTPAGAIATNPTGMQQTKPTKKVAIAISVGIVTLGMLSALAFFLYKYRTKHSVETIQKEKKLVRENSNYVPETSNNSSQPPPQSSFLYIGTVEPNRTSLSEPDRTGNVGNRSLFRKLDNSVKLSDRYRPSPELQPLPPLNKPSDNENHLPPAASSSSSSDEESRVRRFHSPSLSHEEDSYYCTPVSSRHSYRDNGNTSAALVTGAPVVPFSKRTSPKSRLLASSPDRRNIMIPSIKNSSQPPSISPAPPPLQPRRPKFLEPPPALDLRHLHSDESMTSLHLPPPPPPPPPLPPSRRAMPRRKVWSPVRSTISSIAASRKQQQSWSPSQEGAASAYSTNSVTKAASVETDDMDEGKPKLKALHWDKVRATSDCATVWDQLKSSSFQLNEDMMESLFGCNSTNSAPKETVTRKSVLPPVEHENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPESLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKTVLDIPLAFKRVEAMLYRANFEAEVNYLRKSFQTLEVASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGSGGESANENSQNQTSSEFNEDEFKKKGLQVVAGLSKDLGNVKKAAGMDSDVLSSYLLKLEMGLDKVRLVLQYQNPDMQENFFNSTNIFLNDAEEKIARIKADEKKALFLVKEITEYFHGDTAKEEAHPFRVFMIVRDFLNILDQVCKEVGRIQDKTVIGSDRSFQIAASASLPVLSRYHGRQDRSSDEESLSP* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0258 885 MobiDBLite consensus disorder prediction 157 176 - -
Lan18g0258 885 MobiDBLite consensus disorder prediction 264 282 - -
Lan18g0258 885 Gene3D Formin, FH2 domain 443 855 IPR042201 -
Lan18g0258 885 MobiDBLite consensus disorder prediction 394 427 - -
Lan18g0258 885 MobiDBLite consensus disorder prediction 48 87 - -
Lan18g0258 885 ProSiteProfiles Formin homology-2 (FH2) domain profile. 436 860 IPR015425 -
Lan18g0258 885 MobiDBLite consensus disorder prediction 692 713 - -
Lan18g0258 885 PANTHER FORMIN-RELATED 9 885 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lan18g0258 885 MobiDBLite consensus disorder prediction 367 384 - -
Lan18g0258 885 MobiDBLite consensus disorder prediction 44 108 - -
Lan18g0258 885 SUPERFAMILY Formin homology 2 domain (FH2 domain) 371 846 - -
Lan18g0258 885 MobiDBLite consensus disorder prediction 213 282 - -
Lan18g0258 885 MobiDBLite consensus disorder prediction 330 348 - -
Lan18g0258 885 MobiDBLite consensus disorder prediction 248 262 - -
Lan18g0258 885 PANTHER FORMIN-LIKE PROTEIN 9 885 - -
Lan18g0258 885 MobiDBLite consensus disorder prediction 692 709 - -
Lan18g0258 885 MobiDBLite consensus disorder prediction 349 363 - -
Lan18g0258 885 MobiDBLite consensus disorder prediction 297 427 - -
Lan18g0258 885 MobiDBLite consensus disorder prediction 88 108 - -
Lan18g0258 885 Pfam Formin Homology 2 Domain 440 834 IPR015425 -
Lan18g0258 885 SMART it6_source 436 849 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0258 Lan-Chr18 3543376 3547814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0258 389 875 FH2 protein (formin) Gene Family AT5G67470 68.826 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0258 - - gmx:100803578 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0344 17 2501240 2505746 Lan18g0258 18 3543376 3547814 LSH
Lan18g0258 18 3543376 3547814 Lan6g0265 6 2034579 2039326 LSH
Lan17g0344 17 2501240 2505746 Lan18g0258 18 3543376 3547814 PCT
Lan18g0258 18 3543376 3547814 Lan18g0258 18 3543376 3547814 PCT
Lan6g0265 6 2034579 2039326 Lan18g0258 18 3543376 3547814 PCT
Lan18g0258 18 3543376 3547814 Lan17g0344 17 2501240 2505746 PCT
Lan18g0258 18 3543376 3547814 Lan6g0265 6 2034579 2039326 PCT