Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0253 ATGATCTCTGTCATATTGTCTACACTTTTTGTGTACATTACCAGGGCTGACAAGAAAGGCGTTGCGATAGTGAGACACATTAATAAAGGTGTGAATCCAGCATCTGCTAGTGAAATATTTTTCCATGGAAATTATTTGGGTGCAGGTGCTCGGATTGGTGTGATAGCTGGCATGATAGCACTCACAGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATCCACTTGATGGTAATAAAGAAATGGTGGCTATGGGAACAATGAACATTCTTGGTTCATTGACATCATGTTATGTAGCTACAGGATCATTTTCTCGATCAGCGGTGAACTATATGGCTGGTTGTAAAACCGCTGTATCAAACATGGTTATGTCCATTGTTGTACTGTTAACTCTATTAGTCATTACACCACTGTTTAAGTATACACCAAATGCAGTCTTGGCTGCTATTATAATAGCTGCCGTGATAGGCCTTATCGACATTGAAGCTGTAATTCTACTATGGAAGATTGACAAATTCGACTTTGTAGCTTGCATTGGAGCCTTCTTTGGCGTGATCTTCAAAAGTGTTGAGATCGGCCTTCTAATTGCGGTTGCAATATCTTTTGCTAAAATCCTTTTACAAGTGACAAGGCCAAGGACTACAGTACTTGGGAAGGTTCGAGGGACTAGTGTTTATAGGAACATCCATCAATATCCGAAAGCAACTCAAATTCCAGGCATGCTGATTATTAGGGTTGACTCTGCAATCTACTTCTCAAATTCCAACTATATAAAGGAGAGAATTTTGAGATGGCTGACTGATGAAGATGTCCAAAGGACAGGAAGTGAATTGCCCAGAATACAGTATCTCTTAACTGAAATGTCGTCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGTGAAATTATTTAAGAGCCTTCAGAAAAGGGAAGTACAGCTTTTGTTGGCAAACCCGGGACCAATTGTGATGGAGAAGCTCCATACATCAAATTTAATTAACTTGATTGGAGAACATAAAATATTTCTATCAGTCGCTGATGCTGTTGCAACTTCTGGTGCATAG 1080 0.3981 MISVILSTLFVYITRADKKGVAIVRHINKGVNPASASEIFFHGNYLGAGARIGVIAGMIALTEAVAIGRTFAAMKDYPLDGNKEMVAMGTMNILGSLTSCYVATGSFSRSAVNYMAGCKTAVSNMVMSIVVLLTLLVITPLFKYTPNAVLAAIIIAAVIGLIDIEAVILLWKIDKFDFVACIGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTTVLGKVRGTSVYRNIHQYPKATQIPGMLIIRVDSAIYFSNSNYIKERILRWLTDEDVQRTGSELPRIQYLLTEMSSVTDIDTSGIHAFVKLFKSLQKREVQLLLANPGPIVMEKLHTSNLINLIGEHKIFLSVADAVATSGA* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0253 359 ProSiteProfiles STAS domain profile. 234 357 IPR002645 -
Lan18g0253 359 CDD STAS_SulP_like_sulfate_transporter 235 350 - -
Lan18g0253 359 Pfam STAS domain 235 353 IPR002645 -
Lan18g0253 359 Gene3D STAS domain 214 358 IPR036513 -
Lan18g0253 359 Pfam Sulfate permease family 2 182 IPR011547 GO:0016021
Lan18g0253 359 PANTHER SULFATE TRANSPORTER 1 358 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan18g0253 359 SUPERFAMILY SpoIIaa-like 236 355 IPR036513 -
Lan18g0253 359 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 1 358 - -
Lan18g0253 359 TIGRFAM sulP: sulfate permease 1 353 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0253 Lan-Chr18 3264639 3267073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0253 1 356 Inorganic Solute Cotransporters AT1G22150 73.596 1.36e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0253 K17470 - gmx:100784124 565.844