Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0252 ATGAGTTGCAATGGGTGTCGTGTTCTTAGAAAGGGTTGTAGTGAGTCATGTATCCTACGCCCTTGTTTGCAGTGGATCGAAAATCCTGAAGCCCAAGGCCACGCTACCGTTTTCGTAGCTAAATTTTTTGGGCGTGCTTGTCTCATGTCTTTCATTTCCAACGTCTCTGAAACCCAAAGACCTGCTTTGTTTCAGTCTCTGTTGTTTGAAGCGTGCGGTAGAACTGTGAACCCAGTGAACGGTGCCGTTGGGCTTTTATGGACCGGGAACTGGCACGTGTGTCAAGCGGCGGTGGAGACGGTACTCCGCGGCGGCACCCTGACGCCCTTGCCGACGCGGCTCGGCATGGACGCGCCAACTCCGGGGATGGACGAAGCATCTGAAACGGAAGTTACTTACACAGAAATTTGGACTAACCGAAATCAGAACTCGAATTACCGGTTCATGAGCTCTAGATCCAACGTAACTTCCACCGGCGGCGGTGGAAAACGTAAGAGTCCGGAGGCGGCGACGGTGGCGATTGATCTTGATCTCCGATTAACGCCGATTTTCTTGCAGAAGGCTTCCGATTACAAGTCACGTCCAGAAAACCGTCGGCAGTGTTCGCCGTCGATGACGTCGGAGGAATCGGTTACGACGGTGGCGTCCTCGGATAGTGGCAATCGCCGCGGAGAGAGAAAAGTTCTGAACCTTTTTATTTAA 702 0.5242 MSCNGCRVLRKGCSESCILRPCLQWIENPEAQGHATVFVAKFFGRACLMSFISNVSETQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLTPLPTRLGMDAPTPGMDEASETEVTYTEIWTNRNQNSNYRFMSSRSNVTSTGGGGKRKSPEAATVAIDLDLRLTPIFLQKASDYKSRPENRRQCSPSMTSEESVTTVASSDSGNRRGERKVLNLFI* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0252 233 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Lan18g0252 233 MobiDBLite consensus disorder prediction 198 219 - -
Lan18g0252 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 233 - -
Lan18g0252 233 MobiDBLite consensus disorder prediction 189 222 - -
Lan18g0252 233 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lan18g0252 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0252 Lan-Chr18 3246132 3247587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0252 1 232 AS2 family AT3G49940 57.312 6.28e-82 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan18g0252 LOB 3.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0252 - - lang:109332579 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0252 18 3246132 3247587 Lan6g0261 6 1942198 1943327 LSH
Lan18g0252 18 3246132 3247587 Lan8g0527 8 7510423 7511874 PCT
Lan18g0252 18 3246132 3247587 Lan18g0252 18 3246132 3247587 PCT
Lan18g0252 18 3246132 3247587 Lan6g0261 6 1942198 1943327 PCT