Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0248 ATGATGCAATTCACACCTCCGCTTCCATCTTTGCACAAAATAACTACACCTTTTTTTTCAAACCCTACCATGAACCAAAACCAAGTACCTAGTCCTAGAACTACTCCATTCCCTACACCTAAAGCCCTAAGTAGTAGCTTTGGAGATACAAATTGCATGGAACAATTACTTGTTCATTGTGCAAACGCCATAGAAACAAACGATGTAACATTAGCACAACAAATTCTATGGGTCCTCAACAATATAGCACTCCCCGATGGTGACTCGAATCAACGATTAGCCTCCAGCTTCCTCCACGCCCTCGCGGCTCGCGCCGCGAAGAACGGAAGCTGCAAGATGCTAGAAGCAATGATGGGAGAAGAATCTCGCAGCCACCTTGCAATAGATACACACAAATTCAGTGTCATTGAATTAGCCAACTTTGTTGACCTAACACCATGGCATAGATTCGGTTTCACGGCCGCTAATGCAGCCATTATAGAAGCTTCTGAAGGGTTCTCAGTGATTCATATTGTGGACTTAAGCTTGACGCATTGCATGCAAATCCCTATGCTTATCGATGCTATTGCTAGCCGCCACGAAGTTCCACCTTTGATCAAGTTAACCGTAGCTGGTGATAACTGCAGAGACATTCCACCGGTTCTTGATCTTTCTTATGATGAATTAGGAGCTAAGTTAGTTAATTTCGCGAGCTCGAGGAACGTGATAATGGAATTCAGGGTGGTTCATTCGAGTTACACAGATGGGTTTGCATCTTTGATTGAACATTTAAAGTTGCAACACTTAGTTTATGCTTCAGAAGCTCGTGCAACAGAAGCTTTGGTTATAAATTGTCATATGATGCTTCATTATATCCCTGATGAAACCCTTATTCATTATATGAACTCAAACTCTTATGTTTATGATTATGGTTATGATTCTTCCACTTTGTCATTGAGGTCATTGTTCCTTAAAGCAGTGAGGAGTTTAGACCCAACTATTGTCGTTTTGGTTGATGAAGATGCAGATTTAACATCAAATAACTTGGTTTGTAGACTAAGGTCTGCGTTTAATTATCTATGGATACCTTATGATACTGTGGACACGTTTCTCCCAAGAGGGAGTAAACAAAGGCAATGGTATGAAGCAGGTATTTGCTGGAAGATTGAGAATGTGATAGCACATGAAGGACTTCAGAGAGTTGAGAGGGTTGAGCCAAAAAGCAAGTGGGAACAAAGAATGAAGAATGCAAATTTTCATGGTGTTACATTCAGTGAGGATTCTATTTCAGAGGTGAAAGCAATGCTTGATGAACATGCTGCTGGATGGGGATTGAAGAAGGAAGATGAACATATTTTGCTCACTTGGAAAGGGCATAATGTAGTTTTTGCATCTGTTTGGTTGCCTTCTTGA 1392 0.4095 MMQFTPPLPSLHKITTPFFSNPTMNQNQVPSPRTTPFPTPKALSSSFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIALPDGDSNQRLASSFLHALAARAAKNGSCKMLEAMMGEESRSHLAIDTHKFSVIELANFVDLTPWHRFGFTAANAAIIEASEGFSVIHIVDLSLTHCMQIPMLIDAIASRHEVPPLIKLTVAGDNCRDIPPVLDLSYDELGAKLVNFASSRNVIMEFRVVHSSYTDGFASLIEHLKLQHLVYASEARATEALVINCHMMLHYIPDETLIHYMNSNSYVYDYGYDSSTLSLRSLFLKAVRSLDPTIVVLVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAGICWKIENVIAHEGLQRVERVEPKSKWEQRMKNANFHGVTFSEDSISEVKAMLDEHAAGWGLKKEDEHILLTWKGHNVVFASVWLPS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0248 463 ProSiteProfiles GRAS family profile. 44 461 IPR005202 -
Lan18g0248 463 PANTHER SCARECROW-LIKE PROTEIN 32 26 461 - -
Lan18g0248 463 Pfam GRAS domain family 53 460 IPR005202 -
Lan18g0248 463 MobiDBLite consensus disorder prediction 22 42 - -
Lan18g0248 463 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 26 461 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0248 Lan-Chr18 3111086 3113058 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0248 24 462 GRAS Transcription Factor Family AT3G49950 56.885 9.34e-173 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan18g0248 GRAS 3e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0248 - - gmx:100814364 710.679