Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0241 ATGAATATGGAGGCCAGTGGCGGAGTTAGCGGCGGCGTTACGGTGGTGGGATCGGATGCTCCGTCGGAATACCATATAGCTCCGACGAAGGAAAACTCAGCTCCGGGAGGCGGATCCACTGCACCGATTCCGGCGACTCAAGGGATTGTTCCGCCGCCACTTACGGCGCAATTGACGGAGCATGCGGCGGGGACAACGGTACCGGAGAAGAAGAAGAGGGGACGGCCTAGAAAGTATGCACAGGACGGTTCGGTGCTGTCGCCGAAGCCGATATCTTCTGCCGCTCCGATGCCGCCGGTGATTGATTTCACGGCGGAGAAGCGCGGGAAAGTGAAGCCAAGCTCAGTGAGCAAAGCGAAGTTTGAGATAGTGAATTTAGGTGAATGGGTTGCATGCTCAGTTGGTGCTAATTTTACACCTCATATCATCAATGTTAATGCTGGTGAGGATGTTACCATGAAAGTAATATCATTTTCTCAGCAAGGGCGTCGAACTATATGCATTCTTTCAGCAAATGGTTTTATATCAAGTGTCACACTTCGTCAGCCTGATTCTTCTGGGGGAACATTGACATATGAGGGAAGGTTTGAAATTCTGTCTTTATCTGGCTCATTCATGCCAAATGACAATGGAGGAACCCGAAGCAGATCGGGAGGCATGAGTGTTTGTTTAGCTAGTCCAGATGGACGTGTTGTAGGTGGCGGAGTAGCTGGTCTATTGGTGGCTGCCAGTCCTGTGCAGGTAGTGGTGGGCAGTTTTCTGGCAGGAAATCAACATGATCAGAGGCCGAAAAAGCAGAAATACGAGGTTATATCGACTGTGACACCAGCTGCAATTGTTCCAAGCTCTACTACTGATCCGATACATTTTCTGTCATCGACACCTTCCTTCCGAGGAGATAACTGGTCTGCCATGCCAGCGGATGCTACAAATAAGCAAACCGATGTTAATGCAACACTTCCTGGAGGGTAA 972 0.501 MNMEASGGVSGGVTVVGSDAPSEYHIAPTKENSAPGGGSTAPIPATQGIVPPPLTAQLTEHAAGTTVPEKKKRGRPRKYAQDGSVLSPKPISSAAPMPPVIDFTAEKRGKVKPSSVSKAKFEIVNLGEWVACSVGANFTPHIINVNAGEDVTMKVISFSQQGRRTICILSANGFISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDNGGTRSRSGGMSVCLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHDQRPKKQKYEVISTVTPAAIVPSSTTDPIHFLSSTPSFRGDNWSAMPADATNKQTDVNATLPGG* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0241 323 Pfam Plants and Prokaryotes Conserved (PCC) domain 140 253 IPR005175 -
Lan18g0241 323 ProSiteProfiles PPC domain profile profile. 135 274 IPR005175 -
Lan18g0241 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 11 321 - -
Lan18g0241 323 MobiDBLite consensus disorder prediction 65 79 - -
Lan18g0241 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 11 321 IPR039605 GO:0003680
Lan18g0241 323 Gene3D - 140 273 - -
Lan18g0241 323 SUPERFAMILY AF0104/ALDC/Ptd012-like 137 256 - -
Lan18g0241 323 CDD DUF296 139 230 IPR005175 -
Lan18g0241 323 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0241 Lan-Chr18 2810103 2814798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0241 1 320 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 59.322 4.92e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0241 - - gmx:100801730 470.7