Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0239 ATGACAACAAAGCTTGGGTTTTCTTTGTTGTTTTTGAATCTTATCCTTTACATAGCTGCCACCGCGGAATCTGCCGTTTCAAAACGATCTAACCCCACGGAATTCATCAAATCCTCATGCAAGTCCACTCTATACCAGACTCTATGTGTTCATTGTCTCATTGGGTATGCGAATTCGATTCGCCAAAGCGAGCAACAACTAGCCATAGCAGCCTTGAACGTGAGCCTATCATGGACACAATCATGTGCATCATTTGTGAAGAAGAACACCAATATAAGGGGAATCAAGCCTAGGGAGCATAGAGCTATGCAAGATTGCGTAGCAAACATCGACAGTAGTGTTGATAGTCTTCGACAATCGGCTAGAGAGTTGCACCTTATGGGCAATAACGCGATTAGTGAGAAGTTTGATTGGCATATGAGCAACGTACAAACTTGGGTTAGTGCTGCTTTGACATATCAAAGCACTTGTCTTGATGGCTTTGCGGGTCCACAAATGGATGGAAAATTGAAGGTTGCTATTAGGGGAAGAGTTATTAGTGTTTCTCAAGTAACTAGTAATGCTCTTGCCTTGGTTAATCGTTTTGCCTCTAGGCATCAAGCTACTACACTTAATAAAAAACCTTAA 627 0.4195 MTTKLGFSLLFLNLILYIAATAESAVSKRSNPTEFIKSSCKSTLYQTLCVHCLIGYANSIRQSEQQLAIAALNVSLSWTQSCASFVKKNTNIRGIKPREHRAMQDCVANIDSSVDSLRQSARELHLMGNNAISEKFDWHMSNVQTWVSAALTYQSTCLDGFAGPQMDGKLKVAIRGRVISVSQVTSNALALVNRFASRHQATTLNKKP* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0239 208 SMART PMEI_2 31 191 IPR006501 GO:0004857
Lan18g0239 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 199 - -
Lan18g0239 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 195 IPR035513 -
Lan18g0239 208 CDD PMEI-like_3 38 197 - -
Lan18g0239 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 195 IPR035513 -
Lan18g0239 208 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 193 IPR006501 GO:0004857
Lan18g0239 208 Pfam Plant invertase/pectin methylesterase inhibitor 35 191 IPR006501 GO:0004857
Lan18g0239 208 PANTHER PECTINESTERASE INHIBITOR 9 15 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0239 Lan-Chr18 2705902 2706611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0239 18 192 Carbohydrate Esterase AT3G14310 31.844 1.40e-22 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0239 - - jre:108984668 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0239 18 2705902 2706611 Lan6g1059 6 10209151 10210063 LSH