Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0230 ATGGTTTTCTCAAATAACCAAACAATCTTGGTGACTGGTGGTGCTGGTTTTATTGGAACACACACCGTTGTTCAGCTTCTTCAAGATGGTTTTAATGTTTCAATAATTGATAATCTCGAAAACTCTGATATTCAAGCTGTTAACCGTGTTAAGGAAGTGGTTGGTCCTAAGCTTTCCAACAATCTCCAATTTACCCAGGGTGATCTTAGAAATAAAGATGACTTGGAGAAATTATTCTCAAAAACAAATTTTGATGCTGTTATCCACTTTGCTGGATTAAAAGCTGTTGGAGAAAGTGTTGCAAATCCACGTCGGTATTTTGATTTTAATTTGGTTGGCACCATCAATCTTTACCAAGTTATGGCAAAGTATAACTGTAAAAAGATGGTTTTCTCATCATCTGCAACTGTTTATGGACAACCTGAAAGAATACCATGTGTGGAGGATTCCAATTTACAAGCCTTGAATCCCTATGGAAGGACCAAGCTTTTCCTTGAAGAAATAGCACAAGATATTCAGAAAGGTGAGCCAGAATGGAGGATCATTCTGCTGAGATACTTCAATCCAGTTGGAGCCCATGAAAGTGGTAAACTTGGTGAAGATCCCAGAGGTATCCCAAATAACCTCATGCCTTATATTCAACAAGTAGCTGTTGGAAGATTACCCGAACTCAACGTATATGGTCATGATTATCCTACCAAGGATGGCTCTGCGGTCCGGGACTACATCCACGTGATGGACTTAGCAGATGGTCACATTGCTGCCCTGAGAAAGCTTTTCACCCCGGAGAACATAGGTTGTACTGCTTACAACCTAGGAACCGGTCATGGTACATCTGTGTTTGAAATGATTTCAGCGTTTGAAAAAGCTTCTGGCAAGAAAATTCCTGTGAAATTGTGTCCAAGGAGGCCAGGGGATGCAACTGAAGTTTATGCATCTACAGAAAAAGCTGAAAAGGAACTTGGTTGGAAGGCAAAATATGGTGTAGAAGAGATGTGCAGAGACCAATGGAATTGGGCAAAGAATAACCCATGGGGTTACAAGGGAGATAGCCTTGAATGA 1062 0.4068 MVFSNNQTILVTGGAGFIGTHTVVQLLQDGFNVSIIDNLENSDIQAVNRVKEVVGPKLSNNLQFTQGDLRNKDDLEKLFSKTNFDAVIHFAGLKAVGESVANPRRYFDFNLVGTINLYQVMAKYNCKKMVFSSSATVYGQPERIPCVEDSNLQALNPYGRTKLFLEEIAQDIQKGEPEWRIILLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTKDGSAVRDYIHVMDLADGHIAALRKLFTPENIGCTAYNLGTGHGTSVFEMISAFEKASGKKIPVKLCPRRPGDATEVYASTEKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYKGDSLE* 354
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0230 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 348 IPR036291 -
Lan18g0230 353 Gene3D - 198 340 - -
Lan18g0230 353 Gene3D - 9 280 - -
Lan18g0230 353 TIGRFAM galE: UDP-glucose 4-epimerase GalE 9 344 IPR005886 GO:0003978|GO:0006012
Lan18g0230 353 CDD UDP_G4E_1_SDR_e 8 341 IPR005886 GO:0003978|GO:0006012
Lan18g0230 353 Pfam GDP-mannose 4,6 dehydratase 10 335 IPR016040 -
Lan18g0230 353 PANTHER UDP-GLUCOSE 4-EPIMERASE 4 349 - -
Lan18g0230 353 PANTHER BIFUNCTIONAL UDP-GLUCOSE 4-EPIMERASE AND UDP-XYLOSE 4-EPIMERASE 1 4 349 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan18g0230 Lan-Chr18 2444028 2448775 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0230 5 339 Miscellaneous Gene Families AT1G02000 26.136 1.79e-21 93.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0230 K01784 - gmx:100803483 635.565
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0230 18 2444028 2448775 Lan14g0382 14 8294190 8296412 PCT
Lan14g0382 14 8294190 8296412 Lan18g0230 18 2444028 2448775 PCT