Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0229 ATGGAGAAGGTGAATTTTGTTAAGAATGGAGAAGTGAGATTGCCACCAGGGTTCCGTTTCCACCCAACAGATGAGGAATTGGTTGTACAATATTTGAAGCGTAAAGTCTTTTCTTTTCCTTTGCCTGCTTCCATCATTCCTGAGGTTGATGTTTGCAAATCTGACCCTTGGGACTTGCCTGGTGAGTTGGAGGAAGAGAGGTACTTCTTCAGCACAAAGGAAGCCAAATATCCAAATGGGAACAGATCTAACAGAGCTACTAATTCAGGTTACTGGAAGGCAACTGGGTTGGACAAACAAATTGTGACTTCAAAACAAGGTGTGGGTATGAAAAAGACTCTTGTTTTCTATACAGGGAAGCCACCTCATGGTTCCAGAACTGATTGGATCATCCATGAATATCGCCTCCTTAACATCTACACCACTCTCTCTCAGATTCCTATGCAAAATTGGGTTTTATGTCGGATATTTTTGAAGAAGAGAGGTACAACAAAAATAGACATAGGCAAGTTTAACCACAACAAAAAGAACAAGGTGAGGAGGAATAACACTTCAAAGCTGGTTTTCTATGACTTCTTGGCTCAAAAGGACAACAACACAAGTTCATCATCCTCGGATGGAAGTGGAATCACACAGGTTTCAACTTCAATCAATGAATTAGATAAACAACATGAAGAGAGCAGTAGCTGCAACAGTTTCCCTTATTCAAGGAGAAAACCTTAA 723 0.4053 MEKVNFVKNGEVRLPPGFRFHPTDEELVVQYLKRKVFSFPLPASIIPEVDVCKSDPWDLPGELEEERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQIVTSKQGVGMKKTLVFYTGKPPHGSRTDWIIHEYRLLNIYTTLSQIPMQNWVLCRIFLKKRGTTKIDIGKFNHNKKNKVRRNNTSKLVFYDFLAQKDNNTSSSSSDGSGITQVSTSINELDKQHEESSSCNSFPYSRRKP* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0229 240 Pfam No apical meristem (NAM) protein 15 136 IPR003441 GO:0003677|GO:0006355
Lan18g0229 240 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 239 - -
Lan18g0229 240 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 1 239 - -
Lan18g0229 240 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Lan18g0229 240 MobiDBLite consensus disorder prediction 199 218 - -
Lan18g0229 240 MobiDBLite consensus disorder prediction 199 240 - -
Lan18g0229 240 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Lan18g0229 240 ProSiteProfiles NAC domain profile. 14 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0229 Lan-Chr18 2392604 2417485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0229 1 233 NAC Transcription Factor Family AT5G13180 59.055 6.57e-93 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan18g0229 NAM 1.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0229 - - gmx:100170709 340.887