Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0227 ATGCCTCAAGGAACCCTTGAAGTTTTTCTTGTTAGTGCCAAGGGCCTTGAAAATACTGATTTCCTTTGTAACATGGATCCTTATGTGCTCCTTACATGCCGCACTCAGGAGCAACAAAGTAGTGTTGCATCAGGTAAAGGAAGTGACCCAGAGTGGAATGAAACTTTTATATTCAACTTGTCTGAAGGCATTTCTGAACTCAAAATGAAGATTATGGACAGTGATACCTTAACAGCTCATGATCTTGTAGGAGAAGTTGACATTCCATTAGAACCTTTGTTTATTAAAGGAAGCCTACCAATCACAGTATACAATGTTGTCAAGGATGGGCACTATTGTGGAGAGATTAGGGTTGGCCTCAGTTTTAGACCCGAGGAACGCCGCGATAGAGAGCTTGAGGAAAGTTTTGGTGGATGGAAGGAATCTAGTTACTAA 435 0.4138 MPQGTLEVFLVSAKGLENTDFLCNMDPYVLLTCRTQEQQSSVASGKGSDPEWNETFIFNLSEGISELKMKIMDSDTLTAHDLVGEVDIPLEPLFIKGSLPITVYNVVKDGHYCGEIRVGLSFRPEERRDRELEESFGGWKESSY* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0227 144 Gene3D C2 domain 2 125 IPR035892 -
Lan18g0227 144 PANTHER C2 DOMAIN-CONTAINING 1 142 - -
Lan18g0227 144 SMART C2_3c 5 102 IPR000008 -
Lan18g0227 144 PANTHER OS02G0640000 PROTEIN 1 142 - -
Lan18g0227 144 Pfam C2 domain 4 94 IPR000008 -
Lan18g0227 144 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 125 IPR035892 -
Lan18g0227 144 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0227 Lan-Chr18 2365393 2367114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0227 4 119 C2H2 Transcription Factor Family AT4G21160 29.310 2.14e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0227 - - gmx:100806391 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0227 18 2365393 2367114 Lan6g1275 6 13313356 13315914 LSH