Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0212 ATGCAGTTGGCGCCGGGGGGATTGGGAAAAGGGGGAACAGATAACTTAAATGGGTTCCCTAGGGGAGGTGTTAACCAAAGAGAAGCTTTGGATGGCATGCTTGAAGGTAGCCAGCTTGTGTCTGTGTTGAATTGGATAAATGCAGTGCTTCCTAACCTTAATCTTCCCTTAGAAACTTCAGAGGAGGAATTGAGGTCATGGTTGAGGGATGGATTTGTATTATGCAGCATTTTGGACAAGCTGGCTCCTGGTTCAGTGGAAAGAGGAAACGGTTCTTTGGAAGAGTTGGTGGGTGTTAAAAGGTTTCTGGTGGCATTGGATGAATTGGGATTGCCCGGATTTGATTTGTCAGACATGGAGCAGGGATCCATGGTACCTGTGTTGCAGAGCCTTGAGACTCTGAAAAATCATTTTGATTTTAATGCTGCTCGAGAAAATATCCCAAATTCTAGAAAGAGGTGGGGCCAGTCAGACCTAACACCCCTAGAGGAGACTGCTAGTTGCCTGAAGGATGCTCCAAAAACCCAACACACTGTTGACGGTTCTGTTGTAGCAGATGGAATTGCTTCCATAGATGGATTAAAATCTAATGAACTGTCCCAGCTGAAGCGAGGATCACATGTGGATCTTTCAGATGCTAAACTAATGGAATTATTAAATTCAAACAGTTCGGATATTGCCTCAACTCAATTGCTTTTTAACATAGGAAATGGAATTGTCGGTAATATCTTTGAAAGGAAGAATGGAGATTTACCTCATGCTCAGCGTGCAGCATGCATGTTGAGGAAAATTTTGCAAGTAATTGAGTTGCGCTTTTCAAATCAAGCCGAAGGCATGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGAAAAGTACCAATCAAGAATGAATGCACTTGAAAACCTTGCGGTAGGGACAACCGAAGAGAATGAGGTTGTTACAGGTTGGGTTCAGCAGTTGAAGTTTACTTTGCAGCTTGAGCAAAATAAGTTTGAGGAGAAGAAGAAACTGGAAGACCAGGATTTTACGGAATTAAAGAAAGAAAAAGTTCGTAATGAAATTGAAATTTCTACATTGAAGCAAGAATTGGAAATGGCCAAAAGAATGCATGGAGGACAGGTTTTGCAGTTGGAATTGCACGCTAACGAATCTAAAGCTGAATATGAGAAAAAGATACGGGAACTTGAGCGTCATCTGGCCAACGCAAGAAAACAAGTGAAGGATCTGGAGGCATTTTCAGAATCCCGATATTTCAATTGGAAGAATAAAGAACATGCCTACCAAAGTTTCTTAAATTCCCAACACAGAGCTATCCAGAAATTGAGAGCTGGGATGAAGTCCATAAAAAATGAAGTGATAAAAACAAAAAGAAGCTACATGGAGGAATTCAAGTATTTTGGAACCAAGCTCAAAGGTATGGCTGAGGCTGCTGAAAATTATCATAAAGTTCTTGCAGAAAATCGGAAATTGTATAATGAAGTTCAAGATTTGAAAGGAAATATCAGGGTATATTGTCGAATTAGACCATTTCTTCCTGGGCAAAGTAAAAAACACTCAACAGTTGAGTTTGTTGGTGATGATGGAGATTTAATTATTAGCAATCCTCTTAAACCAGGAAAAGAAAGTCGCAAACATTTTAAATTTAACAAGGTTTTTGGTCAAGCAACAAGTCAAGAGGAAGTATTCATCGACACTCAACCACTAATTCGTTCCGTTCTTGATGGATACAATGTGTGTATATTTGCTTATGGTCAAACTGGCTCAGGAAAGACATATACGATGAGTGGACCAAGCCTATCATCAAATTCAGATTGGGGAGTCAACTACCGAGCACTTCATGATCTTTTCCACATCTCCCAGAATAGGAGAAGCTCTATTGTCTATGAAGTTGGTGTTCAGATGGTTGAGATTTATAACGAACAAGTTCGTGATTTACTATCAAGCACCGGTCCTCAAAAAAGACTTGGGATTTGGAATATTACCCAACCAAATGGGTTGTCTGTTCCTGATGCAAGTATGCATTCTGTGAATTCAATGACTGATGTCCTCGAGTTGATGAATATTGGGTTGACGAATCGTGCAACTAGTGCCACAGCCTTAAACGAAAGAAGCAGTAGATCACACAGTGTTCTCTCAATTCATGTTCGTGGAACGGATTTGAAGACCAACTCTCTCTTGCGTGGATGTCTGCATCTTGTAGATCTTGCAGGAAGCGAAAGAGTAGATCGTTCTGAAGCCACTGGTGATAGGCTTAAGGAGGCTCAACATATAAACAAGTCACTATCAGCACTTGGAGATGTGATATTTGCTCTAGCACAAAAGAGTGCACATGTGCCATATAGGAATAGCAAGTTGACTCAGATTCTTCAGAGTTCATTAGGTGGTCAAGCAAAAACCCTGATGTTTGTACAGCTTAATCCTGATGTTGCCTCATATTCTGAAACTATAAGTGCCTTGAAGTTTGCCGAGAGAGTTTCTGGTGTTGAGTTAGGTGCTGCTCGCAGCAACAAAGAGGGAAAGGATGTGAGGGAACTCATGGAGCAGGCGGCATCTCTAAAGGATACAGTTGCAAAGAAGGATGAAGAGATTGAGTGGTTGCAGTCACAGAAGGCTAATCACAATGGTCCAAAGCTTGGTATGATGACCTCAGTAAGGCGCAAGTTATCATCTTCAATGAGACATTCCATAGAGACTCCCCGACCCAGCACAAAGTTTTCAGGAGCAAGGAGCTTTGGAGTAAAAAAAGCAGCTTCGGACATGGACACCTGCTCAGAGTATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAATCAATGGACGATTTCAGGAACAAGTCTAGTTCCCTACGGTTGGAACTCGACAAAGAAGATATCAATCAAAATTTGAATGCGGACACTGAACTCTTAGGATTTGGAGATGCAGATTCGGAGGAGAGATTGAGTGACATATCTGATGGTGGTCTGTCAATGGGGACAGAAACCGATGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTCCCTGAAGTTGAGAAGGCAGCTGAAACTACACCTGCTAAGAACACAACAGCAGACAGCCTTCCAGCCGAGAGCACGGAGAAACCCATCGTAGCATCCAAAATTCCCAAAGCTCCACAAGACACACCAAAACTGCAGACAAGACCTTCCAGGCTATCATTGAATAGAAGCTTGTCAAAGGTTTCATCAAGTCTTAGAAAACCGGCAGCCTGTAGCTCTTCTTCAGTGAAGTCCTCCAAACGGTCGCAATAA 3273 0.4183 MQLAPGGLGKGGTDNLNGFPRGGVNQREALDGMLEGSQLVSVLNWINAVLPNLNLPLETSEEELRSWLRDGFVLCSILDKLAPGSVERGNGSLEELVGVKRFLVALDELGLPGFDLSDMEQGSMVPVLQSLETLKNHFDFNAARENIPNSRKRWGQSDLTPLEETASCLKDAPKTQHTVDGSVVADGIASIDGLKSNELSQLKRGSHVDLSDAKLMELLNSNSSDIASTQLLFNIGNGIVGNIFERKNGDLPHAQRAACMLRKILQVIELRFSNQAEGMKNQNNLFKAREEKYQSRMNALENLAVGTTEENEVVTGWVQQLKFTLQLEQNKFEEKKKLEDQDFTELKKEKVRNEIEISTLKQELEMAKRMHGGQVLQLELHANESKAEYEKKIRELERHLANARKQVKDLEAFSESRYFNWKNKEHAYQSFLNSQHRAIQKLRAGMKSIKNEVIKTKRSYMEEFKYFGTKLKGMAEAAENYHKVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQSKKHSTVEFVGDDGDLIISNPLKPGKESRKHFKFNKVFGQATSQEEVFIDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSNSDWGVNYRALHDLFHISQNRRSSIVYEVGVQMVEIYNEQVRDLLSSTGPQKRLGIWNITQPNGLSVPDASMHSVNSMTDVLELMNIGLTNRATSATALNERSSRSHSVLSIHVRGTDLKTNSLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSAHVPYRNSKLTQILQSSLGGQAKTLMFVQLNPDVASYSETISALKFAERVSGVELGAARSNKEGKDVRELMEQAASLKDTVAKKDEEIEWLQSQKANHNGPKLGMMTSVRRKLSSSMRHSIETPRPSTKFSGARSFGVKKAASDMDTCSEYSDKHSEAGSHQSMDDFRNKSSSLRLELDKEDINQNLNADTELLGFGDADSEERLSDISDGGLSMGTETDGSISSIVEYTLFPEVEKAAETTPAKNTTADSLPAESTEKPIVASKIPKAPQDTPKLQTRPSRLSLNRSLSKVSSSLRKPAACSSSSVKSSKRSQ* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0212 1090 PRINTS Kinesin heavy chain signature 576 597 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0212 1090 PRINTS Kinesin heavy chain signature 699 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0212 1090 PRINTS Kinesin heavy chain signature 730 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0212 1090 PRINTS Kinesin heavy chain signature 779 800 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0212 1090 ProSiteProfiles Kinesin motor domain profile. 501 829 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0212 1090 MobiDBLite consensus disorder prediction 1 20 - -
Lan18g0212 1090 PANTHER KINESIN-LIKE PROTEIN KLP-3 22 1090 - -
Lan18g0212 1090 Pfam Calponin homology (CH) domain 42 138 IPR001715 GO:0005515
Lan18g0212 1090 MobiDBLite consensus disorder prediction 892 906 - -
Lan18g0212 1090 MobiDBLite consensus disorder prediction 892 911 - -
Lan18g0212 1090 SMART ch_5 38 137 IPR001715 GO:0005515
Lan18g0212 1090 Pfam Kinesin motor domain 507 827 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0212 1090 Gene3D Kinesin motor domain 443 831 IPR036961 -
Lan18g0212 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 501 867 IPR027417 -
Lan18g0212 1090 Coils Coil 843 870 - -
Lan18g0212 1090 Coils Coil 379 413 - -
Lan18g0212 1090 Gene3D - 36 139 IPR036872 -
Lan18g0212 1090 MobiDBLite consensus disorder prediction 1050 1090 - -
Lan18g0212 1090 Coils Coil 343 370 - -
Lan18g0212 1090 SUPERFAMILY Calponin-homology domain, CH-domain 40 136 IPR036872 -
Lan18g0212 1090 Coils Coil 474 501 - -
Lan18g0212 1090 MobiDBLite consensus disorder prediction 1014 1090 - -
Lan18g0212 1090 MobiDBLite consensus disorder prediction 925 944 - -
Lan18g0212 1090 ProSiteProfiles Calponin homology (CH) domain profile. 36 139 IPR001715 GO:0005515
Lan18g0212 1090 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 22 1090 - -
Lan18g0212 1090 SMART kinesin_4 499 837 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0212 Lan-Chr18 2107551 2121533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0212 470 863 Calmodulin-binding Proteins AT5G65930 39.547 8.64e-73 262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0212 18 2107551 2121533 Lan6g1263 6 13092292 13100611 LSH