Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0208 ATGCCATCATGGTGGGGAATGTCTTCGTGCAAAGAGTCGAAGCGGACAACGAATAGGGAAAGTATTTTTTGTACAATACAGAGGAAATTTAGAAATGCTTCCGAAGATAGGCGCAACGGTAAATCGGGAGGGACTAAAAGACATCAAAGAAAATCAGCCACAGGAGATGGATATAGATCATTGGTATCTTCCAGATCAACATCGCCATCTGCGCTTTTGTCCCGTTCGAAAAGTTTCGAAGAAAGGTCTGTTCATTCTCAATCAATCCCATCGCCGAAGTTTAAAACATCAGAATTGCAAAGAGAAGCTCTCTATGCATCTCTCAAGGGGGATTCTAATGATAAAGAAAGAGATATTGTCACTACATCTGTCTCTAGTGACAACTCTATTAATACAGGAGACTCATCTGATTCACATATCTTTAGTCATTCGGCGTCCGATTGCGAAAACGGAAGCAAAGCTAATACTAACAGTTCCTATAGAATGGTACAAAAGGATCAATCACATATTACAGTCCAAGAAACATCGAAAGCATCCTCGAAAGCATCACCTCAAGTATGCAATAGTAAGCATTTGCATACCTCAACAAAAGAGGGTCATTTGTATCTGCAAGATCAACAAATTAAGAGTGGTACAAAATGTCTATCTAGTGCTCTACATAGTTCAAGGTCATGTCCTTCTAGTTCAAGCTTGGGCCATAATTCTAGTCATAACTATGCTAGCGGCGAAAGTTCGAGGCAAATATTTTGGCAACCGAACAAATGCAGCTCTGAGTGTTCTCCCAAACCTAGTCACACAATGAAAAGCCTTAGTCCAAGTTCCAAGATATGTCGTGCTTCTACCACGCCTATGCGTCAACGTGCTAGAAATGCTATAGAAGAATCGGATACGAGACATCCTGAGGATGTTAAACAACAAACTCATCCATTACCACTTCCTCTGATTACAATTACTAGTCCATCTCCATTTTCTCCAAGCTATTCTGCGCCGTCTACTCATTCAGCCGCTCGTAGTCCTGCTAGACGACAAAATCCAACAAGCCCGGGTTCACATTGGAAAAAGGGAAAGTTGCTTGGAAGGGGAACATTTGGACATGTATATCTTGGTTTTAACAGTCAAAGTGGCGAGTTGTGCGCAATGAAGGAGGTACCTCTTTTTTACGACGATCCTAAGTCAATGGAAAGTGTTCAGCAACTTGAACAAGAAATTGCGCTGCTAAGTCGTTTTCGACATCCAAACATAGTCCAATATTATGGATCTGAGATGGTAGATGACAAACTTTATATATACTTGGAGTATGTCTCTGGTGGATCAATCTATAAGCTGCTTCAGCAATATGGCGAATTTAGCGAAATCGTTGTTCGTAATTATACTCGGCAAATTCTATTCGGACTCGCATATTTGCATGCTACAAATACAGTTCACCGGGACATTAAGGGAGCTAACATATTGGTGGATCCTAATGGATGGATAAAATTGGCAGATTTCGGTATAGCGAAGCATATTAGTGCCCATTCTTGTCCATTTTCTTTCAAAGGAAGTCCTTATTGGATGGCACCAGAGGTTATCAAAAATTCAATTGGTTGTAATCTTGCTGTTGATATTTGGAGTCTTGGCTGCACTGTTTTGGAGATGGTTACAACAAAACCACCTTGGAGTGACTATGAAGGGGTTGCTGCTATGTTCAAGATTGGGATTAGCAAGGATAATCCAGAAATTCCTGATCATTTATCAGAAGATGGAAAAGATTTTGTGAGGCTTTGTTTGGAAAGAAATCCAGAAAATCGTCCATCAGCTGCTCAACTTTTAGAACACCCTTTTGTTAAAAATGCTTCTCCAGAAAGACCAATTGTGACTAATGATTCTTCAGATACACAAGTTGCTATTATAAATGCAGTAAGATCTCTGGCCATTGGACCTACAAAACATAATTCAAGCTTAGAATCAGAAGTGGTAGCTACCCATCCACTTATATGCATGAGAAATTGTTCCATATCAAGTGATGGCCATACACCAAGGAATATCTCACATCCGATCTCTCCAGTTGGGAGTCGGCGTTTTCCTCGTAATCTGCAAACAAGCTCGATGAGGTCTTCCTCTTCAATATCTAGTCCTCATACTACATCTGGCTCGCCTACACGGCATGGTGGCGGCAGTGGTGCAATCCCATTTCATCAAACAAACCAACCAACATTCTCATATGAAGCAATGGGTATAATCCAAAAGCACAAGCATGAAAAACTTAGGGTCATTCCACAAACAAACCATGCATGTAGCTGCAAGGATAAAACCTCTTCAGATAATGATACTAATGGAAACCATATTAGGAAGATAGAGCATGGAAATCTAAGAGAATTTCATGATGCAAATTCAAATCTAGATGATCGTGTGTCACAACTATTGTTGAGGGATTATGCACGTTTAAATATATCCCTTGATGCTAAGTCCAATTCCACAAGGTTTAATCGCATAAATGACTTGTGA 2484 0.4026 MPSWWGMSSCKESKRTTNRESIFCTIQRKFRNASEDRRNGKSGGTKRHQRKSATGDGYRSLVSSRSTSPSALLSRSKSFEERSVHSQSIPSPKFKTSELQREALYASLKGDSNDKERDIVTTSVSSDNSINTGDSSDSHIFSHSASDCENGSKANTNSSYRMVQKDQSHITVQETSKASSKASPQVCNSKHLHTSTKEGHLYLQDQQIKSGTKCLSSALHSSRSCPSSSSLGHNSSHNYASGESSRQIFWQPNKCSSECSPKPSHTMKSLSPSSKICRASTTPMRQRARNAIEESDTRHPEDVKQQTHPLPLPLITITSPSPFSPSYSAPSTHSAARSPARRQNPTSPGSHWKKGKLLGRGTFGHVYLGFNSQSGELCAMKEVPLFYDDPKSMESVQQLEQEIALLSRFRHPNIVQYYGSEMVDDKLYIYLEYVSGGSIYKLLQQYGEFSEIVVRNYTRQILFGLAYLHATNTVHRDIKGANILVDPNGWIKLADFGIAKHISAHSCPFSFKGSPYWMAPEVIKNSIGCNLAVDIWSLGCTVLEMVTTKPPWSDYEGVAAMFKIGISKDNPEIPDHLSEDGKDFVRLCLERNPENRPSAAQLLEHPFVKNASPERPIVTNDSSDTQVAIINAVRSLAIGPTKHNSSLESEVVATHPLICMRNCSISSDGHTPRNISHPISPVGSRRFPRNLQTSSMRSSSSISSPHTTSGSPTRHGGGSGAIPFHQTNQPTFSYEAMGIIQKHKHEKLRVIPQTNHACSCKDKTSSDNDTNGNHIRKIEHGNLREFHDANSNLDDRVSQLLLRDYARLNISLDAKSNSTRFNRINDL* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0208 827 ProSiteProfiles Protein kinase domain profile. 352 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0208 827 Gene3D Transferase(Phosphotransferase) domain 1 350 633 - -
Lan18g0208 827 CDD STKc_MEKK1_plant 352 608 - -
Lan18g0208 827 MobiDBLite consensus disorder prediction 289 305 - -
Lan18g0208 827 MobiDBLite consensus disorder prediction 311 350 - -
Lan18g0208 827 MobiDBLite consensus disorder prediction 686 715 - -
Lan18g0208 827 MobiDBLite consensus disorder prediction 122 156 - -
Lan18g0208 827 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 101 - -
Lan18g0208 827 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 105 231 - -
Lan18g0208 827 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 219 752 - -
Lan18g0208 827 Pfam Protein kinase domain 353 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0208 827 MobiDBLite consensus disorder prediction 254 288 - -
Lan18g0208 827 MobiDBLite consensus disorder prediction 254 356 - -
Lan18g0208 827 MobiDBLite consensus disorder prediction 169 192 - -
Lan18g0208 827 SUPERFAMILY Protein kinase-like (PK-like) 350 704 IPR011009 -
Lan18g0208 827 MobiDBLite consensus disorder prediction 29 97 - -
Lan18g0208 827 MobiDBLite consensus disorder prediction 56 95 - -
Lan18g0208 827 SMART serkin_6 352 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0208 827 MobiDBLite consensus disorder prediction 169 193 - -
Lan18g0208 827 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Lan18g0208 827 MobiDBLite consensus disorder prediction 669 727 - -
Lan18g0208 827 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 101 - -
Lan18g0208 827 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 105 231 - -
Lan18g0208 827 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 219 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0208 Lan-Chr18 2063614 2068712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0208 1 734 MAP Kinase Kinase Kinase AT1G63700 50.189 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan18g0208 Pkinase 1.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0208 K20717 - gmx:100814422 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0208 18 2063614 2068712 Lan14g0461 14 9906959 9913025 PCT
Lan18g0208 18 2063614 2068712 Lan3g0717 3 13004609 13015567 PCT