Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0201 ATGATCTCAAATAGTTCATCCTTTGATTGCCTTGGACTTGAAGGTGTTGGTAAAAACAATGATAATCTTGTAAAAGATCATGTTGGTATTGCTGAAAGTGACAATGTGAGACAAAAGAACTTGTTTTGTCAGCTTTTAAAGGTTTACCGAGAGGTGAATTCCTCCGGAGGAATTGTTCGGCCTGTGTCGGTTTTGCTCGGGGATGGTCAAGTGCTGGATTTGTACAAATTGTTTTCCCTTGTCAAGGAAAGAGGTGGGTATGCCGCGGTGTCGAGAAAAGGGTCGTGGGGCTTTGTGACGAAGGAATTAGGTTTGGACCTTGAAGTTTTGGCTTCAGTGAAACTTGCTTATGATAAGTATCTGAATGATTTCGAAGCATGGCTCAAGAAGACTTTTGAAGAGAAAATTATAAAAAATAGGAATCATGGATATGGTTGGAGTTTTAACCCGTTTCCAATGGAGATAGAGAAAGAGTTGAGTGTCCTATTGTGTCTTGATCTAAAGGAGAAAGATGACGAACTCGATATAAAGGAGAAAGATGATGAACTCGATATAAAGGAGAAAGACGATCAACGTGATATGAAGGAGAAAGACGACAAACTCGGTATAAAGGAGAAAGACGGTGAACTCGATATAAAGGAGAAAGATGATGAACTTGATATAAAGGATGGCGACAATGAAATTGAGTTAAAATCAAAGAAAATTAGAAGGTTCATTGATTTATTGGTTAACCACAAGAATGAGACAGAATTGTTGGACATCAATAATCAAAATAACATATGTGAGGATGTCCATGTTGATGGAAACGAAAAATTATGCAGCGGTGATAAGCATGATCTTGCTACCTTGGATAAGGAAGATGTTGAGAAGGAATATAATAATCGCAAGCGCAAGCGGGAATCATTGTGTGGAATGCTAAACTGGATGAAGCATATTGCAAAGCATCCTTTGGTTCCTGTAACTCCACCTTTACCAAAACCATCGAAGTGGAAGGAATATAAAGGTGATAACCTTTTTTCCATGTTACTAAGGGCAAGAGAGGTTCTATTGTTGAAACAGTGTGTAGAACCAAATGGTGGACCGGCTTCTTTGCAGAATCAGAAGATGCATCCTTCCATGTATGAGGATGAAGTTGCTCGTGATCACCATTCTACAGCAAGGTTGAAATGTAGTGGAAGGCATGCTACCTCTGTTAAGTCTCGCTTGTGCTCTTGTTGCAATTCGCGTTCTGCCGATGAAAATAGATTGACTACTTCTGTCAACAAGGAGGCAGAAAAATGTCCCCCAAAGGAAACTGCAAAAGTAGATTTGTTGACTGCAAAGATAATGGCAAAAAAGTCTGGTGATACGGTTTGCGAAAAAGGGAATGTTTCTATTGGTCCTCGTTACCAAGCAGAAGTCCCAGAATGGACTGGTGTAGTTTCTGAGAGTGACTCTAAATGGATAGGCACACAAGTATGGCCTCCGCCGGAACAGGACTTGGAACCTGCTACTGAAACATACTTTAATGGGAGAGAAAGAGAAGATAAGTGTAGCTGCGAAGTTATAGGTTCTGTTCAGTGTCATAGATTTCATATTGCTGAAAATAGGTTGAAATTGAAGCTTGAATTGGGACCTTTATTTTACCATTGGGGATTTGATCGTATGGGTGAGGAAGTTTCACTTCAATGGATAACTGAAGAAGAAAAGAAATTTAAGGATTTGTTGAGATCACATGCTCCTATTTGGAACAACACATCCATATACTTTCCAAAGAAGAAAAGAAGAAACTTGGTGAACTATTATTTCAATGAATATGTTATCCAACTAAGAAGCTATCAGAATCGCGTGACTCCGAATAATGTTGACAGTGATGATGATGAAGCAGAATTTGGATCTTTTGGTCATGGTTTTGGGATGGAAGCTCTCATGGTAGATGACGTTTTGCAGGAGTGTTCAGTGAATAAGCAGTGCACCGATTTCGAGTACTAG 1971 0.3947 MISNSSSFDCLGLEGVGKNNDNLVKDHVGIAESDNVRQKNLFCQLLKVYREVNSSGGIVRPVSVLLGDGQVLDLYKLFSLVKERGGYAAVSRKGSWGFVTKELGLDLEVLASVKLAYDKYLNDFEAWLKKTFEEKIIKNRNHGYGWSFNPFPMEIEKELSVLLCLDLKEKDDELDIKEKDDELDIKEKDDQRDMKEKDDKLGIKEKDGELDIKEKDDELDIKDGDNEIELKSKKIRRFIDLLVNHKNETELLDINNQNNICEDVHVDGNEKLCSGDKHDLATLDKEDVEKEYNNRKRKRESLCGMLNWMKHIAKHPLVPVTPPLPKPSKWKEYKGDNLFSMLLRAREVLLLKQCVEPNGGPASLQNQKMHPSMYEDEVARDHHSTARLKCSGRHATSVKSRLCSCCNSRSADENRLTTSVNKEAEKCPPKETAKVDLLTAKIMAKKSGDTVCEKGNVSIGPRYQAEVPEWTGVVSESDSKWIGTQVWPPPEQDLEPATETYFNGREREDKCSCEVIGSVQCHRFHIAENRLKLKLELGPLFYHWGFDRMGEEVSLQWITEEEKKFKDLLRSHAPIWNNTSIYFPKKKRRNLVNYYFNEYVIQLRSYQNRVTPNNVDSDDDEAEFGSFGHGFGMEALMVDDVLQECSVNKQCTDFEY* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0201 656 Gene3D - 29 140 IPR036431 GO:0003677
Lan18g0201 656 SMART ELM2_2 457 508 IPR000949 -
Lan18g0201 656 Pfam ARID/BRIGHT DNA binding domain 40 125 IPR001606 GO:0003677
Lan18g0201 656 SMART ARID_2 33 125 - -
Lan18g0201 656 ProSiteProfiles ELM2 domain profile. 455 495 IPR000949 -
Lan18g0201 656 SUPERFAMILY ARID-like 35 130 IPR036431 GO:0003677
Lan18g0201 656 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 3 655 - -
Lan18g0201 656 CDD ARID 68 125 - -
Lan18g0201 656 SMART bright_3 37 130 IPR001606 GO:0003677
Lan18g0201 656 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 3 655 - -
Lan18g0201 656 ProSiteProfiles ARID domain profile. 36 129 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0201 Lan-Chr18 1927922 1934240 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Lan18g0201 ARID 5.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0201 - - lang:109333235 1266.14