Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0197 ATGGGATTCCCAGTTGGGTACTCAGAATTTTTCTTCCCAAAACTTATTCTCCAAATCCTCTCTCTCTTTTCTTTCATCAGAAAACTAATTTCCACTTTCTTCCAATACATTGGTCTTCAACATTTCATTGAACCGGACACTTCCGGTTCTTATAACCCGAACCGGGTTCCTGAATTTAACTCGGTTCATGCTCTCTTTATCCGTGAAATCCTTCCTGTTGTTCGGTTCGGTGAATTAGTGGGCCCACCTGACAGCTGTGCTGTGTGTCTTAGCGAGTTCGAGGAAGACGATGAGATCAGACGGCTATCCAACTGTACACATGTTTTTCACCGAGGTTGTTTGGACCGTTGGATGGGGTATGATCAGAAAACGTGTCCTTTATGCCGTACACCATTCATGCCACATGATACTACCAAGGGTATCGTCTGGTGGAAGTTTGAGGGTTACACCATACCTAGGCGTTTAGTCCAACGAGTAACCTCTTTTCCCGTTCTCTTGGAATGGGACCATCCACCAGAAGCACGCCGAGTCCTTTAG 537 0.4562 MGFPVGYSEFFFPKLILQILSLFSFIRKLISTFFQYIGLQHFIEPDTSGSYNPNRVPEFNSVHALFIREILPVVRFGELVGPPDSCAVCLSEFEEDDEIRRLSNCTHVFHRGCLDRWMGYDQKTCPLCRTPFMPHDTTKGIVWWKFEGYTIPRRLVQRVTSFPVLLEWDHPPEARRVL* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0197 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 142 IPR013083 -
Lan18g0197 178 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 138 - -
Lan18g0197 178 SMART ring_2 86 128 IPR001841 -
Lan18g0197 178 SUPERFAMILY RING/U-box 66 135 - -
Lan18g0197 178 CDD RING-H2 86 129 - -
Lan18g0197 178 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Lan18g0197 178 PANTHER BRH1 RING FINGER PROTEIN 1 138 - -
Lan18g0197 178 Pfam Ring finger domain 84 129 IPR001841 -
Lan18g0197 178 SMART ringv_2 85 129 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0197 Lan-Chr18 1873412 1881287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0197 1 134 C3H Transcription Factor Family AT1G63840 55.797 2.76e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0197 K16281 - jre:109014495 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1113 18 16137757 16138285 Lan18g0197 18 1873412 1881287 PCT