Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0194 ATGGAAAGACAAGTTTGTGATGAGAAATCAAGGGACATGGGTTCATCAATTGGAATATGCTATTCAGATATATCATCAAATAATCCAACAATTCATCAAACCCATCTTGTGAACCAGATCCAAGGTTTTGTGTCAGACCCAGAGATTTTCAACCTTTCCACAAACATGGATATGATAGGGTTTTCTAAGAATCATATTCATCAACAAAGTTTCTTCAACAAACTTGGTCAACAACAACATCAAGGGAATATTTCTGAAACAACAAGTAGTGATAATCATCTAATCTTGAGTGCTCATGATTCTGCTGCATGGCAAGAGAATAGAACATCATTACTTGTTGATGATTCTTCTCTAAGGTATGTGTTCCCTTCTGAAGGTAATAACCATAACCACACACAAAGTCAAGGCCTTTCACTCTCTCTTAGTTCAAACAATATTGGGTTGCAATCTTTTGAGGTAAGAAATCAACAACACCAACCTGATTTTGCTTCTTCATCAAGTTCTAGAGATGGGTTCTATCCAAAATCATCTCAACAACAACAACAACAAATGTTGCAGCAAGGTGCAAATATTTATCAAGGACATTTCATGCTAAAGAATTCTAAGTTCTTGGTACCTGCACAAGAACTTCTGAACGAGTTTTGTAGTCTAGAAACAAAGGAAAATGATATTGTAAAGCAAAAATCTGATCAGAAGAACAAACAGTCATGGAAAGAGGATAGCGGTAAGAATAAGCATTCTCTTACCTCTTTGGAATTCTTGGAACTTCAGAAGAGAAAGACAAAGCTGCTTTCTATGCTGGAAGAGGTTGATAGAAGATACAGGCACTACCGAAATCAAATGAAGAGTGTTGTTTCTTCATTTGAAGCAGTGGCTGGTAGTGGTGCTGCAATAGTGTACTCAACTTTGGCTTTGAAAGCTATGTCAAGACATTTTAGGTGTTTGAAAGATGGAATTTTGGATCAAATTCAAGAGACAAGGAAAGCAATGGGAGAAAAAGAACAAACTTCACCATGCACAACAAAGGGTGAAACACCAAGGCTTAGAATCCTTGACCAAACACTTAGACAACAAAGAGCATTTCAACAAATGAATATGATGGAAACTCATCCTTGGAGACCCCAACGTGGCCTTCCTGAAAGATCTGTCTCCTTTCTTCGTGCTTGGCTCTTTGAACATTTTCTCCATCCGTACCCAAGTGACGTTGATAAACATATTTTAGCCCGCCAAACTGGTCTCTCAAGAAGCCAGGTTTCAAATTGGTTTATCAATGCAAGGGTGAGGCTATGGAAGCCAATGGTGGAGGAAATATACTTGGAAGAAGCGAAAGAACAAGAAAACAACATGGCATCCTCAGAAGGAGGTACCAATAATGAAGAAGAAAATATTAGCCACAAAAATATTCAAAACCATGAAGATCAAAAACCAACCAAGGCTAGACTCCTTAGAATTGACTCAGAGTGTGTATCATCCATAATCAACAACCCTGATCACCAAAAAGATGACCCAAAGAATTGCTTGAATCCCCATGAACAATGTTTTGGTTCCTTGGAGCTTGATTTTTCATCTTACACACACCACTATGATCACAATGTTAATCAAAGTTTCAATGGTGGCAATGGAAATGGTGTCTCATTGACTCTAGGGTTACAACAACATGGTGAAAGTGGGGTGAGTTTGGCTTTCCCTCAAGCAACACAAAGCTCCATGTTCTACACAAGGGATCAAAATGATGAAGAGTGTCAACCAATTCATTACTCTATTTTGGATGGTGAAACACAAAGTAATATGCCATATAGGAACTTGATAGGAACACAGTTGCTTCATGATTTGGCTGGATAG 1842 0.3817 MERQVCDEKSRDMGSSIGICYSDISSNNPTIHQTHLVNQIQGFVSDPEIFNLSTNMDMIGFSKNHIHQQSFFNKLGQQQHQGNISETTSSDNHLILSAHDSAAWQENRTSLLVDDSSLRYVFPSEGNNHNHTQSQGLSLSLSSNNIGLQSFEVRNQQHQPDFASSSSSRDGFYPKSSQQQQQQMLQQGANIYQGHFMLKNSKFLVPAQELLNEFCSLETKENDIVKQKSDQKNKQSWKEDSGKNKHSLTSLEFLELQKRKTKLLSMLEEVDRRYRHYRNQMKSVVSSFEAVAGSGAAIVYSTLALKAMSRHFRCLKDGILDQIQETRKAMGEKEQTSPCTTKGETPRLRILDQTLRQQRAFQQMNMMETHPWRPQRGLPERSVSFLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEIYLEEAKEQENNMASSEGGTNNEEENISHKNIQNHEDQKPTKARLLRIDSECVSSIINNPDHQKDDPKNCLNPHEQCFGSLELDFSSYTHHYDHNVNQSFNGGNGNGVSLTLGLQQHGESGVSLAFPQATQSSMFYTRDQNDEECQPIHYSILDGETQSNMPYRNLIGTQLLHDLAG* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0194 613 SUPERFAMILY Homeodomain-like 373 438 IPR009057 -
Lan18g0194 613 ProSiteProfiles 'Homeobox' domain profile. 369 432 IPR001356 GO:0003677
Lan18g0194 613 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 7 567 - -
Lan18g0194 613 Pfam Homeobox KN domain 389 428 IPR008422 GO:0003677|GO:0006355
Lan18g0194 613 Gene3D - 375 437 - -
Lan18g0194 613 MobiDBLite consensus disorder prediction 157 185 - -
Lan18g0194 613 SMART HOX_1 372 436 IPR001356 GO:0003677
Lan18g0194 613 Pfam Associated with HOX 197 319 IPR006563 -
Lan18g0194 613 CDD homeodomain 372 433 IPR001356 GO:0003677
Lan18g0194 613 SMART prehox3 192 321 IPR006563 -
Lan18g0194 613 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0194 Lan-Chr18 1816770 1821969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0194 36 612 Homeobox Transcription Factor Family AT5G41410 44.222 8.41e-133 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lan18g0194 POX 3.3e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0194 - - gmx:100800542 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0123 17 717634 721548 Lan18g0194 18 1816770 1821969 PCT
Lan6g0096 6 635349 639819 Lan18g0194 18 1816770 1821969 PCT