Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0181 ATGAACGACTCAGATGTCTCGAAGCAAATTGATCAGATGGTGAGATTTATCCATCAGGAAGCTGAGGAAAAAGCTAACGAAATCTCTGTCTCCGCTCAAGAAGAATTCAACATTGAGAAGCTTCAATTGCTGGAAGCTGAGAAGAAGAAGATTAAGCAGGAGTATGAGCGTAAAGAGAAACAAGTTGAAATTCGCAAGAAAATTGAGTACTCAATGCAGCTGAATGCTTCTCGTATAAAAGTTCTTCAAGCTCAAGATGAAGTTGTTAATTCCATGAAAAATGCCACAGCAAAGGAACTTTTGACTGTCAGCAACCATCATTATATTGATTTTACCCATCATGATCATGCGTACAGGAACCTTATCAAAGATCTCATTATTCAGAGTTTGCTAAGGCTGAAAGAACCTTCTGTCTTATTAAGATGTCGGGAACATGACCTGCACTTGGTAAAGGATGTGCTGGAGTCATCTGCAGAGGAGTATGCTGAAAAAGCAAATGTAGATGCACCAGAGATCATTGTTGACGAAAATGTTTTTCTTCCACCTGCACCAAGCAATGACAATATCCATGAACCCCACTGCTCTGGTGGGGTGGTGCTGGCTTCTCGTGATGGAAAGATTGTGTTTGAAAATACTCTCGATGCACGACTGGATGTGTTGTTCCGTAGCAAGCTTCCAGAGATCCGTAAGCAGCTCTTTGGACAAGTTGCTGCTTGA 717 0.4156 MNDSDVSKQIDQMVRFIHQEAEEKANEISVSAQEEFNIEKLQLLEAEKKKIKQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDEVVNSMKNATAKELLTVSNHHYIDFTHHDHAYRNLIKDLIIQSLLRLKEPSVLLRCREHDLHLVKDVLESSAEEYAEKANVDAPEIIVDENVFLPPAPSNDNIHEPHCSGGVVLASRDGKIVFENTLDARLDVLFRSKLPEIRKQLFGQVAA* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0181 238 Hamap V-type proton ATPase subunit E [atpE]. 8 234 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lan18g0181 238 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 238 - -
Lan18g0181 238 Coils Coil 34 61 - -
Lan18g0181 238 Pfam ATP synthase (E/31 kDa) subunit 16 233 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lan18g0181 238 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 238 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lan18g0181 238 Gene3D - 1 62 - -
Lan18g0181 238 Gene3D - 95 237 IPR038495 -
Lan18g0181 238 SUPERFAMILY V-type ATPase subunit E-like 87 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0181 Lan-Chr18 1625765 1629045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0181 1 238 Primary Pumps ATPases(2) AT4G11150 71.849 1.05e-120 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0181 K02150 - gmx:106794127 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0181 18 1625765 1629045 Lan6g1237 6 12628677 12631789 LSH