Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0179 ATGAAATTCCTTTCCATTTCCATTTCCATTTATGTGTTGTGTTTGGTTTTAGTGAAAGGAAATGGTGAACCTGTTGAAGATAAAGAAATTTTGCTTGATTTTGTGAAAAAGTTTCCACCTTTAAGGCCATTGAATTGGAATGAGAGTTCTTCAGTGTGTGATAATTGGATTGGTGTAACTTGCAATGAAAAAGGGTCAAAAATCATAGCTATTAGATTACCAGGTTTTGGATTTCATGGCACTATTCCACCAAATACTATTAGCAAACTCATTTCACTTCAAATTTTGAGTCTTAGATCCAATTTTATTAGTGGGAATTTCCCTTCTGATTTTTCCAAGCTTAGGAACTTGTCTTTTCTTTATGTTCAGTTCAATAATTTGTCTGGTCCTTTGCCTGATTTTTCAGTTTGGAAGAATCTTAGTGTTGTTGATTTGTCTAATAATGGTTTCAATGGTAGTTTGTCTGTTTCGCTTTCGAATTTGACTCAGCTTTCGAGTTTGAACCTTGCAAATAATTCGATTTCTGGTGAAATTCCTGATCTTATGTTGCCTAGGTTGCAACTGCTTAACTTGTCTAACAACAATTTGCATGGTGTTGTGCCGAATTCGCTGAAGAGGTTTCCCGAGTCAGCATTCTATGGAAACAACATTTCTCTTGGAGTTGGAAATTCTTCGGCTGATTCGCCCGTGCATCCACCACTGGTTTATGGACCATCTTTGAAGTCTAGGAAACATGGAAGGCTTGGCGAAATGGCGCTGCTCGGAATTGTTATTGCTGGTGGTGTTATCGGCCTCGTAGGGTTTGCATTTTTAATGTTAGTGTGCTTCTCAAGAAGGAGAACGGATGAAGATGGTGATGGTCATGATGCCTTTGGTAGGGAATTGCAGAAGGGAGGAATGTCTCCCGAAAAAGCGGTTTCGAGAAAGCAGGATGCAAGTAATAAACTGACTTTCTTCGAGGGATGTAACTATGCCTTCGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAAGTGTTAGGGAAGGGAACATTTGGTACTGCATACAAGGCAGTACTAGAGGATGCAAACACCGTCGTTGTGAAGAGGTTAAAGGATGTAGCTGTCGGAAAGAAGGATTTCGAGCAACACATGGAGATTGTAGGAAATCTTAAACATGAGAATGTGGTTGAACTTAAGGCATATTATTATTCTAAAGATGAGAAACTCATGGTGTATGAGTACTATAGTGAAGGGAGCATTGCTTCTATGTTGCATGGTAAAAGAGGCGAGGATAGGGTGACTTTAGATTGGGATACTCGGCTGAGAATAGCTCTAGGTGCTGCAAGAGGCATTGCACGAATCCATTTCGAGAATGGTGGTAAGCTTGTACATGGCAACATCAAATCCTCAAATATCTTTCTCAACACTAAACAGTTCGGATGTGTATCTGACCTCGGCCTCGCAACAATAATGAGCTCGCTCACCCCGCCCATTTCTCGATCCTCTGGCTACCGTGCACCTGAAGTTACTGACTCAAGGAAAGCAGGACAAGCTTCTGATGTTTACAGCTTCGGCGTTGTATTACTAGAGCTTCTAACTAGGAAATCCCCTATCCACACAACCATCGGCGACGAGATTATCCATCTGGTGAGGTGGGTTCATTCAGTTGTGAGAGAGGAGTGGACAGCTGAAGTGTTTGACTTAGAACTGATGAGATATCCAAACATAGAGGAAGAGATGGTGGAAATGTTACAGATAGCCATGTCATGTGTCGTAAGGATGCCTGATCAGCGACCAAAAATGTCCGAAATCGTGAAGATGATAGAAAACGTTAGGCAGCTTGATGGAGTGACTCAGCAGCCGTCATCATCTGAGAAACAATCACACATAAAATTGTCTCAACATGATGATGATAACATGTCTTCCACTCCATCCTTTAAATTCTCAAAATTAAGTGAATGA 1941 0.4106 MKFLSISISIYVLCLVLVKGNGEPVEDKEILLDFVKKFPPLRPLNWNESSSVCDNWIGVTCNEKGSKIIAIRLPGFGFHGTIPPNTISKLISLQILSLRSNFISGNFPSDFSKLRNLSFLYVQFNNLSGPLPDFSVWKNLSVVDLSNNGFNGSLSVSLSNLTQLSSLNLANNSISGEIPDLMLPRLQLLNLSNNNLHGVVPNSLKRFPESAFYGNNISLGVGNSSADSPVHPPLVYGPSLKSRKHGRLGEMALLGIVIAGGVIGLVGFAFLMLVCFSRRRTDEDGDGHDAFGRELQKGGMSPEKAVSRKQDASNKLTFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAVLEDANTVVVKRLKDVAVGKKDFEQHMEIVGNLKHENVVELKAYYYSKDEKLMVYEYYSEGSIASMLHGKRGEDRVTLDWDTRLRIALGAARGIARIHFENGGKLVHGNIKSSNIFLNTKQFGCVSDLGLATIMSSLTPPISRSSGYRAPEVTDSRKAGQASDVYSFGVVLLELLTRKSPIHTTIGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEIVKMIENVRQLDGVTQQPSSSEKQSHIKLSQHDDDNMSSTPSFKFSKLSE* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0179 646 Gene3D Phosphorylase Kinase; domain 1 300 407 - -
Lan18g0179 646 PANTHER OS05G0588300 PROTEIN 19 616 - -
Lan18g0179 646 SUPERFAMILY Protein kinase-like (PK-like) 337 628 IPR011009 -
Lan18g0179 646 SUPERFAMILY L domain-like 38 206 - -
Lan18g0179 646 ProSiteProfiles Protein kinase domain profile. 333 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0179 646 Pfam Protein kinase domain 336 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0179 646 Gene3D Transferase(Phosphotransferase) domain 1 409 631 - -
Lan18g0179 646 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Lan18g0179 646 ProSitePatterns Protein kinases ATP-binding region signature. 339 370 IPR017441 GO:0005524
Lan18g0179 646 Gene3D Ribonuclease Inhibitor 137 224 IPR032675 -
Lan18g0179 646 MobiDBLite consensus disorder prediction 608 646 - -
Lan18g0179 646 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Lan18g0179 646 PANTHER PROTEIN, PUTATIVE-RELATED 19 616 - -
Lan18g0179 646 MobiDBLite consensus disorder prediction 630 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0179 Lan-Chr18 1593769 1596760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0179 16 638 Receptor kinase-like Gene Family AT4G23740 63.694 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan18g0179 Pkinase 2.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0179 - - lang:109349930 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0179 18 1593769 1596760 Lan6g1236 6 12616235 12620886 LSH