Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0168 ATGATGCAAGAAAGAAACTCAGAAGTTGAACTTGGTTCTTGTTTATCAAATCTCATATTATCTAGCAACACAAATACCCTAGACTCAATTTTCTCTCACTATCCAAAACCAGATTCCACTGCTATGTTACACCCATTAGGCTCTTCATCAGTGTATCTAAACCAAATAGATATGCTTCAAAGTTTCTACAAAGAAAGTTTACTAAATGTGTCATTTGTTTCTTCTACTAACACCACTTGTTCCATAAGCACTTGGAAGAAAAAAGTGTACCGTGGAGTTAGGCAAAGACAACGTGGAAAATGGGTATCAGAGATTAGACTTCCTCAGAATAGAAAAAGGGTTTGGCTTGGCACTTATGATAGTCCTGAACCTGCAGCTTTTGCTTATGATCGTGCTGCTTATAAGCTAAGAGGTGAATATGCACGTTTGAATTTCCCTAACCTTAATGATTCTAAAGTAATATGTAACCTATTAGGTTTTGAAGATTCAATGAAATTGAATGCTTTGAAGAGTTCAGTAGATGCTAAAATTAAAGCTATATGGCATAAAGAGAAAAGGGAAAAAGCTAAGAAGAAAAGTGATGCAAAGAAGCTTGGTTCTTGTGATAATATTATGGATAAGAATTGTTATGGTGATAGTGAGAAAGAACAGAAGAGAGAGTCAATGTCATTGTCTTGTTCTTCATCTTCTTTAATGTTGTCGGAATCAAGTTTTTGTGATGGTTTAACAAATGAGTTTCTTTCACCAAGTGTTTCAAATGAGAGTTCAATAATGGTGCCTGAGGAATTGGGTATGGAAGATTTTTGTTCCTTGGAAAGAATGCCTTCATTTGATCCTGAGTTGATTTGGGAAGTTCTGGGAAATTAG 867 0.3518 MMQERNSEVELGSCLSNLILSSNTNTLDSIFSHYPKPDSTAMLHPLGSSSVYLNQIDMLQSFYKESLLNVSFVSSTNTTCSISTWKKKVYRGVRQRQRGKWVSEIRLPQNRKRVWLGTYDSPEPAAFAYDRAAYKLRGEYARLNFPNLNDSKVICNLLGFEDSMKLNALKSSVDAKIKAIWHKEKREKAKKKSDAKKLGSCDNIMDKNCYGDSEKEQKRESMSLSCSSSSLMLSESSFCDGLTNEFLSPSVSNESSIMVPEELGMEDFCSLERMPSFDPELIWEVLGN* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0168 288 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Lan18g0168 288 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Lan18g0168 288 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 10 287 - -
Lan18g0168 288 CDD AP2 90 148 IPR001471 GO:0003700|GO:0006355
Lan18g0168 288 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Lan18g0168 288 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Lan18g0168 288 PRINTS Ethylene responsive element binding protein signature 128 148 IPR001471 GO:0003700|GO:0006355
Lan18g0168 288 Pfam AP2 domain 89 139 IPR001471 GO:0003700|GO:0006355
Lan18g0168 288 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 10 287 - -
Lan18g0168 288 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0168 Lan-Chr18 1433272 1434313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0168 10 288 AP2-EREBP Transcription Factor Family AT1G64380 41.945 2.13e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan18g0168 AP2 8.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0168 - - lang:109332433 545.428