Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0167 ATGGCTGATATCTCTAACTATAGTGGTCATGATGGGTCCTCCATCCAAAGACCAACCATCAAGTTTACCAAACTCTTCATCAATGGAGAATTTGTTGATTCCATTTCAGGCAAGACATTTGAGACAATAGATCCCACAACATGCGAAGTAACAGCTAGGATTAGTGAAGCAGATAAAGAAGACGTTGACCTTGCTGTTAAAGCTGCTCGTCAAGCATTTGATTTTGGTCCATGGCCTCGCATGTCTGGCTTGGAAAGGTCAAAAATAATGTTGAAATGGGCTGACCTAATTGAAGAACATGTAGAAGAATTAGCAGCATTGGACACCATTGATGGTGGGAAGCTTTATCATTATTCCAAGGATTATGAAATTCCTCTAGCTGCAAGTATGCTACGTTACTATGCTGGTGCTGCTGATAAAATCCATGGTCAAGTATTAAAAGCATCAATGGAGTTCCATGCTTATACACTAATGGAACCAGTTGGTGTTGTTGGTCACATAATTCCATGGAATGGACCCTCCTTTTTGTTATTCACCAAGGTTAGTCCTTCAATAGCTGCTGGCTGCACCATGGTTGTCAAGCCTGCTGAACAAACACCTCTTTCTGCATTGTTTTATGCTCATCTGGCTAACCAAGCTGGAGTCCCAGATGGAGTGATTAATGTAGTACAAGGATATGGACACAAAGCTGGTGCAGCCATAGCCTCACACATGGACATAGATGCGGTAAGCTTCACTGGTTCCACAGAAGTAGGACGCAAAATAATGGAAGCTGCAGCTAGGAGCAATTTGAAACAAGTTTCACTTGAATTAGGAGGAAAGTCACCTCTCATTGTTTTTGATGATGCTGATTTAGACAAAGCTGCTGAGTTTGCAGTTCTAGGCATCTTCTTTAACAAGGGAGAAGTGTGTTGTGCAAGTTCACGTGTGTTAGTTCAAGAAGGGATCTATGATGAATTTGAAAAGAAGTTGCTGGAGAAGGCAAAAGCTTGGGCAATTGGTGACCCTTTTGATTCTAAAACTCAACATGGGCCTCAGACTAGCAAGGACCAGTATGAAAAAATTCTTTCCTATATTGAGATTGGAAAGAGAGAAGGGGCTACCCTTTTGTTAGGAGGCAAACCAGTGGACACTAAAGGTTATTACATTGAACCTACAATTTTCTCTGATGTAAAGGAGGACATGCGTATAGCACAAGAAGAAATATTTGGCCCATTGTTGTCGGTGTTGAAGTTCAAAACCGTAGAGGAAGCAATTAAGATGGCCAACAACACCAAATATGGCCTAGCAGCTGGTATTATTACAAAAAATTTGGATACTGCAAACACTGTGTCAAGGTCTATTCGTGCAGGCATTATTTGGATCAATTGCTACTATGCCCTAGGGAATGATATTCCTTTTGGAGGGTATAAGATGAGTGGTTTTGGAAAAGATTATGGATTGGATGCACTTTATAAATTCTTACATGTTAAATCTGTTGTAACTCCCATTTATAATTCTCCATGGCTTTGA 1512 0.4061 MADISNYSGHDGSSIQRPTIKFTKLFINGEFVDSISGKTFETIDPTTCEVTARISEADKEDVDLAVKAARQAFDFGPWPRMSGLERSKIMLKWADLIEEHVEELAALDTIDGGKLYHYSKDYEIPLAASMLRYYAGAADKIHGQVLKASMEFHAYTLMEPVGVVGHIIPWNGPSFLLFTKVSPSIAAGCTMVVKPAEQTPLSALFYAHLANQAGVPDGVINVVQGYGHKAGAAIASHMDIDAVSFTGSTEVGRKIMEAAARSNLKQVSLELGGKSPLIVFDDADLDKAAEFAVLGIFFNKGEVCCASSRVLVQEGIYDEFEKKLLEKAKAWAIGDPFDSKTQHGPQTSKDQYEKILSYIEIGKREGATLLLGGKPVDTKGYYIEPTIFSDVKEDMRIAQEEIFGPLLSVLKFKTVEEAIKMANNTKYGLAAGIITKNLDTANTVSRSIRAGIIWINCYYALGNDIPFGGYKMSGFGKDYGLDALYKFLHVKSVVTPIYNSPWL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0167 503 SUPERFAMILY ALDH-like 18 499 IPR016161 GO:0016491
Lan18g0167 503 Pfam Aldehyde dehydrogenase family 32 493 IPR015590 GO:0016491
Lan18g0167 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
Lan18g0167 503 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 8 503 - -
Lan18g0167 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 8 503 - -
Lan18g0167 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
Lan18g0167 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
Lan18g0167 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 491 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0167 Lan-Chr18 1396857 1403745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0167 4 503 Aldehyde Dehydrogenase Gene Family AT3G24503 66.068 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0167 K12355 - gmx:100783920 782.326