LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan18g0152	ATGTCAAGAATAATTCAAGAGAAGTTAGGTGCAGGAAGAGTTGTAGCTGTTGCAATTGAAAACAACAAAACAAGCCAATATGCTGCAAAATGGGCTGTTGATAATTTACTTCCAAAAGAACAATCTTTGTTACTAATCCATGTTAAACAAAAAGCATCATCAATTGCTACACCATCTGGAAGCTATATAGCTCTTGATGCTAACGACGATGTCGCTAGAGCATACAAGCAACAAATGTACAACGAATCGAGGGAGCTTTTCGCTTCATTTCGCGTCTTCTGCAATAGAAAAAGTATACAATGCCAAGAGATCTTGTTAGAGGACACAGATGTATCTAAGGCATTAATAGAAGGTATCAACACATATTCCATTGAGCTTCTGGTACTTGGGGCAGCATCAAAGAGTGGTCTTGTAAGAAGATTTAGAACAACAGATGTACCAAACCAAGTGTCAAAAGGGGTGCCACCATTTTGCACTCTGTACATTATTTCCAAAGGAAAAATATCATCTGTGAAATCTGCTACTGCTCCACTAACTACTAAACCTGCAATCAGTAGCAATGCATTGGAGCAGCAGTATCAACTTGCCCCTAGTCCGGATAGAATGGATGCGCAACTGATGCGCAACAATCCACCACGATCATCAATAGAGAGGCCAACATATGGTGCACCCCGGCCATCACTCGAAGAAGAAATCAAATCACCATTCACGAGATCCGGTAGATCATATCAAAGATCAAACGAATCCTCAATATCAGATTGTGACATATCATTTGTGAGCAGTGCAAGGCCAAGTGTCGATAGGATGTTCCCGTCATTGTATGACGAAATGGACTTTTCAAGGCTTTCAACAGGCTCAGATTATGATGCTAGAAGCTCTAGTTCATCTTTTTCGGGTGCTAAGTCAATTGATCAGGGTGACTACTCATTCTGTTCACAAGACAGTGGGATTTCAATGTCATCATTAAGGTTATCAACTTCGGATGATGTGGAAGCTGAAATGAGGAGACTGAAGTTAGAACTGAAGCAGACAATGGAAATGTATAGTACTGCTTGCAAGGAAGCTCTAACAGCAAAGCAAAAGGCGATGGAACTTCAGCGTTGGAAATTGGAAGAACAACGGAAAATGGATGAGTTTCATATGGCCGAAGAAGCAGCATTGGCAGTAGCTGAGAAGGAGAAAGCAAGAGCTAAAGCTGCAATGGAGGCAGCAGAAACAAATAGGAAAATTGCAGAGTTTCAAGCACAACAAAGAATGAACTCAGAATCTGATCAGAAGAAGAAAACAGAAGATACTATTTCACAAGGTCATGCAAGGTACAGAAAATACTGTATTGAGGAGATTGAAAATGCAACAAACAACTTTGCCCCTTCCCTCAAGATTGGTGAAGGAGGTTATGGACCAGTGTATAGGTGTGAACTAGATCACACACCAGTTGCAATTAAAGTGCTAAAGCCGGATGCATCTCAAGGACGGTCGCAGTTTCAGCAGGAGGTTGAAGTGCTAAGTTGCATGAGGCATCCAAACATGGTTCTCCTCCTCGGAGCATGTCCGGAATATGGTTGTCTAGTGTATGAGTACATGGCTAATGGAAGCTTGGATGATTGCCTCTTCAGGAGAGGTAAGTCACCAGCTCTTCCTTGGCAGCTAAGATTCAGAATTGCCGCAGAAATTGCCACCGGCCTCAATTTCCTTCACCAGGCAAAGCCAGAACCGCTGGTGCACCGTGACTTAAAACCAGGAAACATCTTGCTTGACCGCAATTTCGTGAGCAAGATCAGTGATGTTGGATTGGCGAGGCTTGTACCTCCTACGGTCGCGGACACTGTAACGCAATATCGAATGACATCAACTGCAGGAACATTCTGCTACATTGATCCTGAGTACCAACAAACAGGCATGCTCGGAATCAAGTCTGATGTATACTCACTTGGGATCATGCTGCTACAGATCATAACAGCCAAGCCACCAATGGGGTTAACTCATCAGGTTGGAAGATCTATAGAGAATGGTACTTTTTCTGAGATGCTTGACCCTGCAGTTGAGGACTGGCCACTTGAACATGCTATGCATTTTGCTAAGCTCGCGTTGCAGTGTGCGGAAATGAGAAGAAAAGATAGACCTGATCTTGGGAAAGTTTTATTGCCTGAGCTCAATAAGCTAAGAGATTTCGCTGAAGAAAACTTGCCTATGATGATGATGTTTGGTGCCGGATTCACTGCCAGAAACAACAACACTTACTCATACTCCGCATTTTCCTCGTCTACAAATCAGGATACTATGAGTGAATCTCAAATGTCTGGAATGTCTGGTTACGAAAGCCGGTCAAGTACATCCTCATTGAGTAATAATAATAGTTTTGTTGCAACAAAGATGATTTGA	2382	0.4257	MSRIIQEKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKEQSLLLIHVKQKASSIATPSGSYIALDANDDVARAYKQQMYNESRELFASFRVFCNRKSIQCQEILLEDTDVSKALIEGINTYSIELLVLGAASKSGLVRRFRTTDVPNQVSKGVPPFCTLYIISKGKISSVKSATAPLTTKPAISSNALEQQYQLAPSPDRMDAQLMRNNPPRSSIERPTYGAPRPSLEEEIKSPFTRSGRSYQRSNESSISDCDISFVSSARPSVDRMFPSLYDEMDFSRLSTGSDYDARSSSSSFSGAKSIDQGDYSFCSQDSGISMSSLRLSTSDDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAMELQRWKLEEQRKMDEFHMAEEAALAVAEKEKARAKAAMEAAETNRKIAEFQAQQRMNSESDQKKKTEDTISQGHARYRKYCIEEIENATNNFAPSLKIGEGGYGPVYRCELDHTPVAIKVLKPDASQGRSQFQQEVEVLSCMRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGKSPALPWQLRFRIAAEIATGLNFLHQAKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPTVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQIITAKPPMGLTHQVGRSIENGTFSEMLDPAVEDWPLEHAMHFAKLALQCAEMRRKDRPDLGKVLLPELNKLRDFAEENLPMMMMFGAGFTARNNNTYSYSAFSSSTNQDTMSESQMSGMSGYESRSSTSSLSNNNSFVATKMI*	794

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan18g0152	793	PANTHER	ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE	6	782	-	-
	Lan18g0152	793	SUPERFAMILY	Protein kinase-like (PK-like)	435	714	IPR011009	-
	Lan18g0152	793	SMART	serkin_6	455	725	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan18g0152	793	Gene3D	Phosphorylase Kinase; domain 1	434	527	-	-
	Lan18g0152	793	Pfam	Protein kinase domain	460	710	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan18g0152	793	MobiDBLite	consensus disorder prediction	208	248	-	-
	Lan18g0152	793	CDD	STK_N	14	166	-	-
	Lan18g0152	793	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	15	141	-	-
	Lan18g0152	793	Gene3D	HUPs	13	157	IPR014729	-
	Lan18g0152	793	Pfam	Universal stress protein family	13	151	IPR006016	-
	Lan18g0152	793	ProSiteProfiles	Protein kinase domain profile.	455	718	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan18g0152	793	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	573	585	IPR008271	GO:0004672\|GO:0006468
	Lan18g0152	793	Coils	Coil	327	347	-	-
	Lan18g0152	793	Gene3D	Transferase(Phosphotransferase) domain 1	528	732	-	-
	Lan18g0152	793	Coils	Coil	353	373	-	-
	Lan18g0152	793	PANTHER	OS02G0152300 PROTEIN	6	782	-	-
	Lan18g0152	793	Coils	Coil	387	416	-	-
	Lan18g0152	793	MobiDBLite	consensus disorder prediction	753	783	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan18g0152	Lan-Chr18	1236427	1240928	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan18g0152	15	729	Receptor kinase-like Gene Family	AT5G35380	56.570	0.0	758

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Lan18g0152		Pkinase	9.6e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan18g0152	-		-	gmx:100803837	1137.09