Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0151 ATGGCACTCATCATAATTGGTGTTGTTAATAATAACTATACAACATGTTGGATCAAAACATTCTTCATCATTTTATGCTTTATTGTTGTTGGTTCTTATGGTGCTTTAGACTCTGAATTGCTCATAAAGTTTAGGGACAAGTTACAAAACAATAATGCATTATCTTCATGGAATGCTTTAACCACTCCTTGTGTTTCTGATCATGGTGCTAATAAAGCTAAAAATTGGGCTGGGGTTATTTGCAATGGAGGGAAAGTTTGGGGGTTGAAACTTGAGAATATGGGGCTAAAAGGGGTTATTGATGTGGATTCTCTTAAGGAGTTACCATATCTTAGAACTATAAGTTTTATGAATAATGATTTTGATGGTACATTGCCAGAGATAAATAAGCTAGTTGGTTTGAAAACAATTTACCTTTCAAACAACAAGTTCTCTGGGGAGATTCATGCTTCAGCTTTTGAGGGTATGAAATGGTTGAAGAAAATTCATTTTTCAAATAATCAGTTTAGTGGTGCTATTCCAAGTTCTTTGACAAAGTTGTCAAGACTTATGGATTTAAGGTTGGATGGAAACAAATTCAGTGGTCCTATTCCTTCTTTTCAACAGAATACTTTGAAATCATTTTCTGTAACTAATAATCAATTGCTGGGAGAAATTCCTGCATCCCTTAGTAAGATCCCACATCATTCCTTTTCTGGTAATGAAGGGTTATGTGGAGCCCCATTGGAAGCATGTGTTGATGGTCATCGTGCAAAGAAAGTCTCATTTGTGTGCATCATTGTTGTTGCAGTAGTTGTTGGTTTAGCAATGATATGTATTATTGGAGCAATAATATTCATCCTTCACCGTAGAAGAAAAAGAAATGCCATAACTTCCATAGAGAACAATGATTCACCTTCATCAAAAGGGCATAACAAAAAAGCAGTGAATGAAACAGGTGATGGGAGTCATAGATCAACAAGATCAACAAGCTCAAACCATAGCAGAAGAGATAACAACATGAAACTAAGCTTCATAAAAGAAGATAGTGAGAGATTTGATTTGCATGAATTGCTTAGGGCTTCTGCAGAAATATTGGGTAGTGGATGTTATAGTTCTTCTTATAAGGCATCATTGATGAGTGGAACAAAGATAGTGGTGAAGAGGTTTAAACAAATGAACAATGTAGGAAGGGAAGAGTTTCAAGAACATATGAGAAGAATAGGAAGGTTGAATCATAGTAATTTGCTTCCACTTGTGGCTTATTATTATAGAAAGGAAGAGAAGCTTTTGGTTTCTCACTATGTTCAGAATGGAAGTTTAGCTGTTCGCCTTCATGGACACCAAGCCCTAGGGGAACCAAGTCTTGATTGGGCAACTAGGTTGAAGATTGTGAAAGGCATAGCAAAAGGTCTTGAATATCTATACAAGGACATGCCAAGTCTAATTGCACCACATGGGAATCTTAAATCCTCTAATGTTCTTCTAACTCAATCATTTGAACCACTCCTAAGTGATTATGGTTTGGTCCCAGTGATAAACCAAGAGCTAGCTCAAGACATAATTGTTATATACAAATCTCCTGAGTACTTAAACCATGGTAGGATCACAAAGAAGAGTGATGTTTGGTGCCTTGGGATACTAATATTGGAGATTTTGACCGGAAAGTTCCCTTCAAATTTCTTGCAACAAGGTAAAGGAAGTGAATTGAGTTTGGCAAATTGGGTCCTTTCAATTGTCCCACAAGAGTGGACTAATGAAGTGTTTGATAAAGATATGGGAGAAATAAATAATAGTGAGGGAGAAATGGTAAAGCTTTTGAAGGTTGCATTGGAATGTTGTGAAGGGGATGTGGATAAGAGATTGGATTTGAAAGAAGCATTAGAGAAGATCCAAGAAGTGAAAGAGAGGGACCATGAGTCATGA 1905 0.3648 MALIIIGVVNNNYTTCWIKTFFIILCFIVVGSYGALDSELLIKFRDKLQNNNALSSWNALTTPCVSDHGANKAKNWAGVICNGGKVWGLKLENMGLKGVIDVDSLKELPYLRTISFMNNDFDGTLPEINKLVGLKTIYLSNNKFSGEIHASAFEGMKWLKKIHFSNNQFSGAIPSSLTKLSRLMDLRLDGNKFSGPIPSFQQNTLKSFSVTNNQLLGEIPASLSKIPHHSFSGNEGLCGAPLEACVDGHRAKKVSFVCIIVVAVVVGLAMICIIGAIIFILHRRRKRNAITSIENNDSPSSKGHNKKAVNETGDGSHRSTRSTSSNHSRRDNNMKLSFIKEDSERFDLHELLRASAEILGSGCYSSSYKASLMSGTKIVVKRFKQMNNVGREEFQEHMRRIGRLNHSNLLPLVAYYYRKEEKLLVSHYVQNGSLAVRLHGHQALGEPSLDWATRLKIVKGIAKGLEYLYKDMPSLIAPHGNLKSSNVLLTQSFEPLLSDYGLVPVINQELAQDIIVIYKSPEYLNHGRITKKSDVWCLGILILEILTGKFPSNFLQQGKGSELSLANWVLSIVPQEWTNEVFDKDMGEINNSEGEMVKLLKVALECCEGDVDKRLDLKEALEKIQEVKERDHES* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0151 634 MobiDBLite consensus disorder prediction 315 332 - -
Lan18g0151 634 PANTHER LRR RECEPTOR-LIKE KINASE 18 633 - -
Lan18g0151 634 Pfam Leucine rich repeat N-terminal domain 37 82 IPR013210 -
Lan18g0151 634 Pfam Protein tyrosine and serine/threonine kinase 357 623 IPR001245 GO:0004672|GO:0006468
Lan18g0151 634 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 633 - -
Lan18g0151 634 MobiDBLite consensus disorder prediction 292 333 - -
Lan18g0151 634 ProSiteProfiles Protein kinase domain profile. 353 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0151 634 Pfam Leucine rich repeat 133 193 IPR001611 GO:0005515
Lan18g0151 634 Gene3D Phosphorylase Kinase; domain 1 318 428 - -
Lan18g0151 634 MobiDBLite consensus disorder prediction 292 306 - -
Lan18g0151 634 SUPERFAMILY Protein kinase-like (PK-like) 357 625 IPR011009 -
Lan18g0151 634 Gene3D Ribonuclease Inhibitor 203 245 IPR032675 -
Lan18g0151 634 Gene3D Ribonuclease Inhibitor 36 202 IPR032675 -
Lan18g0151 634 Gene3D Transferase(Phosphotransferase) domain 1 429 633 - -
Lan18g0151 634 SUPERFAMILY L domain-like 74 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0151 Lan-Chr18 1229340 1232803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0151 24 631 Receptor kinase-like Gene Family AT5G35390 52.208 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan18g0151 PK_Tyr_Ser-Thr 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0151 - - gmx:100804368 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1159 17 19475888 19479554 Lan18g0151 18 1229340 1232803 LSH
Lan18g0151 18 1229340 1232803 Lan6g1187 6 11958002 11961852 LSH