Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0141 ATGGTTAGAAAGTGCTCACATTGTGGAAACATAGGCCACAATTCAAGGACTTGTACATCTTTTAGAGGCACTTCCTTTGTAGGACTTCGTCTCTTTGGTGTGCAACTAGATATATCATCATCATCGTCATCATCATCTTGTGTTACAATCAAGAAAAGCTTTAGCATGAACTCATTGCTCTCATCATATTCTACATCTTCTTCATTTTCTTCATCAAGAATAAGCATTGATGAATATTCTGATAAAACATTTGTTGGGTATCTATCAGATTGTCTCATAGGTCCAACCCAAGAGAGGAAGAAAGGAGTTCCATGGACAGAAGAGGAACATAGAGCATTCATTTTTGGACTTGAAAAATTGGGAAAAGGTGATTGGAGAGGTATCTCTAGAAACTATGTCACTACCAAAACTCCAACACAAGTTGCAAGCCATGCTCAAAAGTATTTTCTGAGATTAGCAACATTGAATAACAAAAAGAGACGTTCAAGTCTCTTTGACATGGTTGGTAGCAGCAAAACCAAGATGAAACAAAAATGTGAAGTTGAGAATGATGCAACATTATCATTGCTAGGGTACCTTAATAACTTTCAACATAAGCAAGAACATGAAAGTGTGCCAATTTGGCTACATACCCAGATGAATAATTCTTCAAATGTTGCAATGCCAGATTTGGAACTCACTCTTGCAGCCCCTAAGGTTAAGGCTAAGACCCTAGAACAAAATAAATCATCACCTACTCCATTCATTCTTGGGCCAATTAGCGTGACTTAG 771 0.3748 MVRKCSHCGNIGHNSRTCTSFRGTSFVGLRLFGVQLDISSSSSSSSCVTIKKSFSMNSLLSSYSTSSSFSSSRISIDEYSDKTFVGYLSDCLIGPTQERKKGVPWTEEEHRAFIFGLEKLGKGDWRGISRNYVTTKTPTQVASHAQKYFLRLATLNNKKRRSSLFDMVGSSKTKMKQKCEVENDATLSLLGYLNNFQHKQEHESVPIWLHTQMNNSSNVAMPDLELTLAAPKVKAKTLEQNKSSPTPFILGPISVT* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0141 256 Gene3D - 103 155 - -
Lan18g0141 256 ProSiteProfiles SANT domain profile. 105 153 IPR017884 -
Lan18g0141 256 SUPERFAMILY Homeodomain-like 98 153 IPR009057 -
Lan18g0141 256 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 100 151 IPR006447 GO:0003677
Lan18g0141 256 CDD SANT 104 149 IPR001005 -
Lan18g0141 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 153 IPR017930 -
Lan18g0141 256 PANTHER TRANSCRIPTION FACTOR KUA1 1 181 - -
Lan18g0141 256 ProSiteProfiles Myb-like domain profile. 97 149 IPR001005 -
Lan18g0141 256 Pfam Myb-like DNA-binding domain 104 149 IPR001005 -
Lan18g0141 256 SMART sant 101 151 IPR001005 -
Lan18g0141 256 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 1 181 - -
Lan18g0141 256 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0141 Lan-Chr18 1135151 1137757 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan18g0141 Myb_DNA-binding 5.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0141 - - gmx:778052 285.804