Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan18g0119 | ATGACCGGAACGGCGAAGATAGATTCCGATCGGAAGAGGAAGAAAGCGTCGATCTCTACGGCGGAGAAGGAAAATCCAAAGGATAAGAAATCGAAGATGTCATCATCGAACAAACATGGTAGTAGTAGTAGTGGTGGCGGTGGTGTTGAAGTTAGGGCATCGCATATATTGATCAAACACGAAGGTTCTAGAAGAAAAGCTTCGTGGAAGGATCCAGAAGGACGCGTTATCAAGAATACTACTAGAGAAAGCGCTGTTTCTCAGATTAAGGTAATTCGAGACGACATCGTTTCGGGAAAGGTTAAGTTTGAGGACGTTGCGGCTCGTTGCTCCGATTGCAGCTCAGCCAAACGCGGCGGTGATCTTGGTCCTTTTGGTCGTGGGCAGATGCAGAAGCCTTTCGAAGAAGCAACGTTTGGTCTTAAAGTTGGTGAAATTAGTGATATAGTGGATACTGATAGTGGAGTCCACATAATTAAGAGAACAAAGTGA | 492 | 0.4533 | MTGTAKIDSDRKRKKASISTAEKENPKDKKSKMSSSNKHGSSSSGGGGVEVRASHILIKHEGSRRKASWKDPEGRVIKNTTRESAVSQIKVIRDDIVSGKVKFEDVAARCSDCSSAKRGGDLGPFGRGQMQKPFEEATFGLKVGEISDIVDTDSGVHIIKRTK* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan18g0119 | 163 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Lan18g0119 | 163 | MobiDBLite | consensus disorder prediction | 1 | 78 | - | - | |
| Lan18g0119 | 163 | Gene3D | - | 48 | 163 | IPR046357 | GO:0003755 | |
| Lan18g0119 | 163 | SUPERFAMILY | FKBP-like | 50 | 162 | - | - | |
| Lan18g0119 | 163 | MobiDBLite | consensus disorder prediction | 54 | 78 | - | - | |
| Lan18g0119 | 163 | Pfam | PPIC-type PPIASE domain | 55 | 162 | IPR000297 | GO:0003755 | |
| Lan18g0119 | 163 | ProSiteProfiles | PpiC-type peptidyl-prolyl cis-trans isomerase family profile. | 48 | 163 | IPR000297 | GO:0003755 | |
| Lan18g0119 | 163 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 3 | 162 | - | - | |
| Lan18g0119 | 163 | ProSitePatterns | PpiC-type peptidyl-prolyl cis-trans isomerase signature. | 103 | 123 | IPR023058 | - | |
| Lan18g0119 | 163 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 3 | 162 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan18g0119 | Lan-Chr18 | 939885 | 942406 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan18g0119 | K09578 | - | gmx:100500451 | 221.476 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan6g1482 | 6 | 21673007 | 21678165 | Lan18g0119 | 18 | 939885 | 942406 | LSH |