Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0113 ATGTTTCAAACCTACCATAGAGATACACAAATACATGTTCTGAAACATAATCTGCTAGATATGGGAGAAATACTAAGAGAGACAGTTTCAGCATTGGAGAAGGAAGAAAGTTCAGAAGAAGCACAGGCTCAATTGGATATATGGAAGTACATATTTGGATTTGTGGAACCAGCAGTGGTGAAATGTGCCATTGAACTTGGCATAGCTGAAGCCATTGAAAACAATGGAGGACCTATGACATTCTCTGAGTTATCATCAACCCTAGGGTGTGACCCTTCCCTTCTTAACCGCATCATGAGATTCTTAACTCATAGGAACATATTCAAAGCCATACCCACCAGCACAAGCACCAACCATGGCTATTCCTATGCACAAACACCTCTCTCTCGTCGTTTGATGAGAAATGATAAACATAGCATGGCTGCTTTCATTCTTCTTGAAACTAGTCCTGTGATGCTAGCACCATGGCATAGTCTAAGTGCTTGTGTTTTGGCTAATGGAAATACCTCATTTGAGAAAGCTCATGGTCAAGATGTGTGGAAATATGCTGCTGAAAATCTTGATCATAGTAATCTCATCAATGATGCAATGGCATGCCATGCAAATCTAACTGTGCCTGCTATTATTGAAGATTACAGTGAGGTTTTTGATGGAATCAATAGTTTGGTTGATGTGGGTGGTGGAAATGGCACAGCCATGAGTATTGTGGCTAAGGCTTGTTCTTGGATAAGAGCAATTAACTTTGATCTTCAACATGTAATTGATAAGGCACCAGAGATTGAAAGAGTGGAACATGTGGCTGGTGACATGTTTGTACAAGTTCCAAAAGCTGATGCTGCTTTTATTATGGCAGTTTTACATGATTGGGGAGATGAAGAATGCATTCAAATCTTAAAGAAGTGTAGAGAAGCAATTCCAAAGGAAAATGGAAGGGTTATTATTGCTGAGGTAGTGATTGAAGAAGGAGGGAATAAAGAAAGGTTAAAGGACACAAGATTGATGTTAGATATGGTAATGATGGCACATACCAACTTAGGCAAAGAGAGAACACTGAAAGAATGGGATCATGTTATCAAAATGGCTGGATTCAGCACATACACTGTCAAATCCATCAAGAATATTGTGAATTATGTTATTATGGCTTTTCCATGA 1152 0.3906 MFQTYHRDTQIHVLKHNLLDMGEILRETVSALEKEESSEEAQAQLDIWKYIFGFVEPAVVKCAIELGIAEAIENNGGPMTFSELSSTLGCDPSLLNRIMRFLTHRNIFKAIPTSTSTNHGYSYAQTPLSRRLMRNDKHSMAAFILLETSPVMLAPWHSLSACVLANGNTSFEKAHGQDVWKYAAENLDHSNLINDAMACHANLTVPAIIEDYSEVFDGINSLVDVGGGNGTAMSIVAKACSWIRAINFDLQHVIDKAPEIERVEHVAGDMFVQVPKADAAFIMAVLHDWGDEECIQILKKCREAIPKENGRVIIAEVVIEEGGNKERLKDTRLMLDMVMMAHTNLGKERTLKEWDHVIKMAGFSTYTVKSIKNIVNYVIMAFP* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0113 383 SUPERFAMILY "Winged helix" DNA-binding domain 37 136 IPR036390 -
Lan18g0113 383 Pfam O-methyltransferase domain 156 364 IPR001077 GO:0008171
Lan18g0113 383 Pfam Dimerisation domain 59 103 IPR012967 GO:0046983
Lan18g0113 383 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 48 383 IPR016461 GO:0008168
Lan18g0113 383 Gene3D - 29 132 IPR036388 -
Lan18g0113 383 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 33 375 - -
Lan18g0113 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 379 IPR029063 -
Lan18g0113 383 PIRSF O-mtase 25 383 IPR016461 GO:0008168
Lan18g0113 383 PANTHER O-METHYLTRANSFERASE 33 375 IPR016461 GO:0008168
Lan18g0113 383 CDD AdoMet_MTases 222 314 - -
Lan18g0113 383 Gene3D Vaccinia Virus protein VP39 133 382 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0113 Lan-Chr18 836528 838907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0113 55 368 Monolignol Biosynthesis Gene Families AT5G54160 36.196 1.63e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0113 K22588 - gmx:100782951 474.552