Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0083 ATGGATTCTACACATGCTACTTTTCTCACCACTCTTTTAGTCTTCAAGAACACCATTAGAGAAGAGTTGATTAGGAGTGTGCATGTCTACAAAGTAAGGGGTGGAAAGGAAAGGGAAGTTGAAAGAGAGTTTGTTTTTTCAGAGAGTGGTTCTTATGGTGAAATGCAAGCTAGTCCAATTCTCAGGTTACAGAAAATTTGTGTTTCACAAGTTTCTGAAGGGTATCAGAATGGAGTATGGCTTTGTATATTTGCTTTTCACACAGATCAATGGCCTCAATTTTGCAGCATTCCATTCCTGTTGTTGGTCTCCAGAAATCCAAAGCTTAAGATGATTCCGGGCTTGCTCAATGATCTCCGTGTGATATACGAGTTGCCATGTAAATCAGAAGACAGAAGTATTCCATCAGACTCTCCAGGAGAATGCCAAGCAAAGACAAATGATTGCCAACCACCAAAAAAGACCATGCCGATGCTTCGACAGGATCTAAATTGTCTTCCTATTGACGATGACATGTCTGAGTCATTGGACAATAAGCTTGATGTTGAAACCTTACCAGGTATTATGGAGAAGAAAAGAAGGGCACACAGTGACCACATAGCAAAAATTGCCTTACCAGATTTGGTCAAGTACTTTGATGTGCCGATAATAGAAGCTTCAAGAAATCTAAATGTTGGACTAACTGTCCTCAAGAGAAAATGCAGAGAATTTGGTATTCCTCGCTGGCCTCATCGGAAGATCAAATCACTTGACGGTCTCATTCATGATCTACAGGAAGAGGCAAGACAACAAGAGTCGGAGGGCGAGGCTGCAGCCGAGGCAGTGGCAGAGAGGAAAAGGATGTTGGAGAGTGAAAAAGAAAATATAGAGAGGAAACCATCAGTGGACATAAAATATGAAACTAAGAGATTCAGGCAAGAAATCTTCAAGAAAAGGCATAGAGCTAGAATTCTTCAAAAACAGATTTCTACACTCTCCAACACTTAG 987 0.4083 MDSTHATFLTTLLVFKNTIREELIRSVHVYKVRGGKEREVEREFVFSESGSYGEMQASPILRLQKICVSQVSEGYQNGVWLCIFAFHTDQWPQFCSIPFLLLVSRNPKLKMIPGLLNDLRVIYELPCKSEDRSIPSDSPGECQAKTNDCQPPKKTMPMLRQDLNCLPIDDDMSESLDNKLDVETLPGIMEKKRRAHSDHIAKIALPDLVKYFDVPIIEASRNLNVGLTVLKRKCREFGIPRWPHRKIKSLDGLIHDLQEEARQQESEGEAAAEAVAERKRMLESEKENIERKPSVDIKYETKRFRQEIFKKRHRARILQKQISTLSNT* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0083 328 ProSiteProfiles RWP-RK domain profile. 185 270 IPR003035 -
Lan18g0083 328 PANTHER PROTEIN RKD4 13 321 IPR044607 GO:0003700
Lan18g0083 328 Pfam RWP-RK domain 203 250 IPR003035 -
Lan18g0083 328 PANTHER PROTEIN RKD5 13 321 - -
Lan18g0083 328 Coils Coil 247 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0083 Lan-Chr18 610357 614631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0083 19 325 AtRKD Transcription Factor Family AT4G35590 46.605 3.93e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lan18g0083 RWP-RK 5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0083 - - gmx:113001653 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0151 17 934763 939475 Lan18g0083 18 610357 614631 LSH