LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan18g0080	ATGGAGGAAATGAAATCTGTGAATGATTCAACCCAATTGGCTGATGTAAAGAATCTTCAAGATGACGTCACTTCAGACAATGCAGTGCTTGAAGATGAGAAGAAAACAATTTCAAAGTTGGAATCTGAGAATGCTTTGAAAGTAGATGAATTTGGAAGATATCTCAAGGAAGGTCCTGCAGATAGTGAATCTGATGATTCTCGCTATCGTCGAACTGGTAGGCTAAACAGAAGAGACAGAAGCCATAGTCGCAGCCGATCTCCTCCACAAAGGAGGAGTAGGAGGAGGAGGAGTCCCCGTGGGATTAGGGGTAGAAGAAGCCGGTCTCGAAGCCGGTCCCCTCGGCGCCGTAGAAGCAGGAGTAAGTCTCCCATCATAAGACGTTCAGGTGAGTTTGGCAATGTGAAAAGGGACAAGAGTCAGTGCTTTGACTTCTCTCGAGGAAGATGCTACCGTGGAGCATCTTGTCGGTACATTCATCATGAATCTAACAGGAATGCTACTTCAAGGCGCTTTAAGAATAATAATGATCTGGAAGTGGATTCTCATGAAAACAATTCTGGTGTTAACGAAGGCTTGAAGAATATTGCTTCTAACATATCAGATTATGAGCATGGTGGAGTCAGAAGTCAGGATGTGGACCTTTTCCAGAATGTAAATGGTCACGAAGTAGAGCCCAGAAAAGAGGATTCTGTTAGGCATGCTGTTGTGTGTTCTACCTCTGGTTTCGGCAGTCACTTAGTCAGTAACGATCCAAATAATTTTGAAAGATTCAGAAAGGTTGCTCCTGAAGTTCAGGAAACTTTAGTAGTCAGAGAGGAGCATAAGACTTTAGCCAACAACAATGATAGTTCTCAGAATGCATTGAATTCTCATCAACCACATATGAGTATGTCCAATGTGTCTGATTCATCATTTGATAAAAAATCGACGATTTCTGCTACTGCTAATATGGTTTCTAATAGTGATCCAATACCATATGTGTTACCATCAACTCAGCAACAGTCAGCCCCTAGTTCAGTTGGTATATGTCTCTCATCAGAACAGCCTCCATTGCACTTCGAGGCACATCAAGAGATGCGTCCACATAGCAGCTCCTCGGTGGAAGTTCCACTTCATACTTACCAGTTGCCTCCTCCTCCTCCTCCTCCTGTTGCTTCACATTCCCAGGGTGAAAATAATGTGAATGTGCCACAAATTCCAATGGAATATGGTGTGACGCAACAAAGTGCATTCTTTCCTTTTCAATTCACTACCAGAGGACAGTTTGAACATTACCCCGCTCCATTTCACACACAAAATTTTCAATTTAACTTACCACCTAATAGAACATCCTTACCGCTACCACCTCCACCACCACTACCACCACCACTGGCAGTAAAAAGTTCTGGTTTTAGTTCAGGAGTTGCAGAACCATATATATCTGAAGAATTTAATCAGCGTCAATTGCATTCAACTAACTTTGCTTCTCAGACTTCTATGGCGCATGCCATGCCGTCTCATTCTCAGAGTTCTGAGTCATTCGACCAAGCACACACTTTAATGCAGGATCGTTCACGAACTTTCATGCTTAAAGACGCTTCATCTCCAAAGCATCTGCCTCAGGGGAACTCAGCAAGTCAATCTCTTTCAGGCTCTAATCTTCATAGAGATGACCGTCATAAGCAGCTTTCAATGCAAGATTCATCATCACAGCAGCAGCAATCAATTTATAATTTTCCATATTCTGCATCTGAGATTAAATTGGGTGTGCCTGGGGAGAATCTCACTGTATCCAGATTTCCATCAGGTGTTCTGGATAAAAATCATTCAACCTCTCTTCCTGCTTTTGGGGGATCACAAATTTCTGCACATTACAATCCTTATGCATCAACCTTTGAGCAGCCACTGAGTTCCAAATTCAGTTCAAGTATTTTTAGACATGAAAATGACATAATTCATAATAACAATTATGGTTCTTCTGTATTGAACCATGCCCCTATAACTAGGGAAGGTGTTGGTACCGGTGGTGGATCAAGACAATCAGCATCCTCTCCAAAATCTGCTAGAGCTGACGGTCAGATGTTACCTAGGTCTGATGGCAACCTATATGATCCACTATTTGACTGTATTGAACCATCGTCGCCTTCTCTGAAGAAATTTAATTTTGACAAGAACCAGGAAGTTATAGGTGAATCCAACATCAGCCCAAGGCCCAAAAGTTCTTCGATGTCTTTAGACACGGAAGAGAAGAACAAACATGAGGATGTTGCCTCTTCCACTTCTCAAAGTAATGATGAATATGGTGACACAACAGATGCAGAAGTTGGTGCTGTTGAAAATGAGAGCCTAAGTAATCATGTGGATGTTGCAAAGATGACTACGGGGGGTGTTGAGATTAATCAGGTCAAATCTCCTGGGAAAAGAAAGAAGAGCAAGGATTCTAGATCGATGAAATTGTTCAAAATTTCCATTGCGAACTTCGTAAAGGAGGTTTTGAAACCATCATGGCAGCAGGGTAATATGAGTAAGGTGGCTTTCAAAACCATTGTTAAAAAGACTGTAGATAAGGTGTCAGGAGCCATGAAAGACCACCATGTACCCAATTCTCAAGTGAAGATAAGTCAATACATTGACTCATCACAGCAGAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTCAAGATGTAA	2679	0.4184	MEEMKSVNDSTQLADVKNLQDDVTSDNAVLEDEKKTISKLESENALKVDEFGRYLKEGPADSESDDSRYRRTGRLNRRDRSHSRSRSPPQRRSRRRRSPRGIRGRRSRSRSRSPRRRRSRSKSPIIRRSGEFGNVKRDKSQCFDFSRGRCYRGASCRYIHHESNRNATSRRFKNNNDLEVDSHENNSGVNEGLKNIASNISDYEHGGVRSQDVDLFQNVNGHEVEPRKEDSVRHAVVCSTSGFGSHLVSNDPNNFERFRKVAPEVQETLVVREEHKTLANNNDSSQNALNSHQPHMSMSNVSDSSFDKKSTISATANMVSNSDPIPYVLPSTQQQSAPSSVGICLSSEQPPLHFEAHQEMRPHSSSSVEVPLHTYQLPPPPPPPVASHSQGENNVNVPQIPMEYGVTQQSAFFPFQFTTRGQFEHYPAPFHTQNFQFNLPPNRTSLPLPPPPPLPPPLAVKSSGFSSGVAEPYISEEFNQRQLHSTNFASQTSMAHAMPSHSQSSESFDQAHTLMQDRSRTFMLKDASSPKHLPQGNSASQSLSGSNLHRDDRHKQLSMQDSSSQQQQSIYNFPYSASEIKLGVPGENLTVSRFPSGVLDKNHSTSLPAFGGSQISAHYNPYASTFEQPLSSKFSSSIFRHENDIIHNNNYGSSVLNHAPITREGVGTGGGSRQSASSPKSARADGQMLPRSDGNLYDPLFDCIEPSSPSLKKFNFDKNQEVIGESNISPRPKSSSMSLDTEEKNKHEDVASSTSQSNDEYGDTTDAEVGAVENESLSNHVDVAKMTTGGVEINQVKSPGKRKKSKDSRSMKLFKISIANFVKEVLKPSWQQGNMSKVAFKTIVKKTVDKVSGAMKDHHVPNSQVKISQYIDSSQQKLTKLVMGYVDKYVKM*	893

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	668	682	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	662	692	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	527	568	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	7	25	-	-
	Lan18g0080	892	Gene3D	-	136	192	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	74	123	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	722	764	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	531	546	-	-
	Lan18g0080	892	PANTHER	PROTEIN FRIGIDA-ESSENTIAL 1	11	892	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	278	308	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	722	736	-	-
	Lan18g0080	892	PANTHER	EXPRESSED PROTEIN	11	892	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	1	27	-	-
	Lan18g0080	892	Coils	Coil	30	50	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	280	308	-	-
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	48	73	-	-
	Lan18g0080	892	ProSiteProfiles	Zinc finger C3H1-type profile.	136	163	IPR000571	GO:0046872
	Lan18g0080	892	MobiDBLite	consensus disorder prediction	48	132	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan18g0080	Lan-Chr18	593779	598042	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C3H	Lan18g0080		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan18g0080	-		-	lang:109332907	1617.05