Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0072 ATGATTATTGATATGCCTTCTTCCACTGCCCCGAATGTGAGAGCAAGCAGATCTTCCCTTAGCTCTAGCAATGGCAATGAGGATATTCCTGTACACAACTATGCTACCGACAACAATGGTGATGATGGATATGACAGTGATAGCTCAAATTTTGCACCACCCACATCATCAACTCCATCAATGGCTGTTCCAGCAGAACTCGCTGGAGCTGTACATTTGGTTGACAGATTTCAGGTGGATGGGTTTGTAAAAATGATGCAGAAACAAATCCAATCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTGTAGGACCCCAAGTTCGAGAAAAATTTACATTTGAGGACATGCTGTGTTTCCAAAAGGAACCAATACCAACATCATTGCTTAAGATTAATGGTGATTTAGTAAGTCGTGCAACAAAACTATTCCAGATGGTTTTGAAATATATGGGAGTTGATTCATCTGATCATGTAACTCCAGTAAGCTTTGATGAACGAGTTGAGCTTGTAGGGAAACTTTACAAGCAAAGTTTGAAACGTTCAGAACTTCGGGATGAACTTTTTGTTCAGATATCAAAACAAACAAGAAATAACCCTGAGAGGCAATCCTTAATTAAAGCATGGGAGCTCATGTATTTATGTGCATCCTCCATGCCTCCTAGTAAAGACATCGGGGGTTATCTGTCAGAATATGTTCATAACGTAGCACATGATGTGGCTACGGATTCCGATATCCAAGCCTTGGCATTAAATACATTAAATGCTTTGAAGCGCTCTGTCAAGGCTGGTCCGAGGCATGTAATACCTGTGCGTGAGGAGATTGAAGCTTTGTTGACCGGGAGAAAGCTCACAACCATAGTGTTTTTCCTGGACGAAACTTTTGAAGAAATCACATATGACATGTCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCCGGACTCATTAAACTGTCAACATACTCTAGCTTTAGTTTGTTTGAATGTCGTAAAGTTGTGACCGGCTCCAAATCACCTGATCCTGGGAGCGAGGAGTATGTTGGGTTAGACGATAACAAATATATTGGGGATCTCCTGGCAGAATTTAAATCAGCAAAGGATCGAAGCAAGGGAGAAATCTTGCATTGTAAACTGATATTCAAGAAAAAGTTATTTCGCGAGTCAGATGAAGCCATAACAGATCCGATGTTTGTGATATTGTCTTATGTACAATTGCAACATGATTATATTTTGGGAAATTATCCTATTGGAAGGGATGACGCTGCCAAGCTTTCTGCACTACAAATATTGACCGAGATTGGATTTGTTAGCACACCTGAATCAAGCACTGACTGGAATTCACTTTTGGAGCGATTCTTGCCTAGACAAATTGCAATGACACGAGCAAAACGTGAATGGGAGTTGGACATTCTTTCTCGTTATCATTCATTGGAGCATCTAACAAAAGATGATGCAAGACAACAATTTCTGCGTATATTGAGAGCACTCCCTTATGGGAGTTCTGTTTTCTTCAATGTTCGTAAGATTGATGATCCTATTGGACTCTTGCCTGGACGAATAATATTAGGAATTAACAAAAGAGGGATTCATTTTTTCCGTCCAGTACCTAAGGAATATTTGCATTCAGCCGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAACATTGCAGTGTTTTTTAAAATGCGAGTTGCAGGTGTTCTTCACATATTCCAGTTCGAAACCAAGCAGGGAGAAGAAATTTGTGTGGCTCTTCAGACACATATAAACGATGTAATGCTGCGCCGCTATTCGAAAGCACGATCTGCTGCTAGTGGTTCTTCCAATGGAGATATTTCTAATAGTTTTAAGCCTTCTAATTTGGAATTATATGAGAAACGTGTTCAAGATTTATCAAAACGAATTGAAGATTCTCAAAGAAGTGTTGATCAATTGCTGGAAGAATTGCACGAGAAGCAAATACAAGAAGAGAAAATGCAAGAAGAATTGGAAGGCTTGAAAGAGTCCTTTAAAGCCGATAAGCAAAATCTTGAGGAAGTTACAAATGATCGTGATAGGCTTAGATCATTATGCATGGAAAAAGATAAAGCACTTCAGGCTGCCATTCTAGAGAAAAGGAACACAGAAGCAAGGATGGCCAAGTTGAATAATCTTGCAACAGAGAACACTCCCAAGAAGGGTCTTGTTGGAGGAAATAACCAAGTGTTTCAAAAGCTTGAAGATGAGTTAAAACTTTGTAAAGATAAGCTTCATGCAGCGGAAGAAACTATCAAAAGCTTGGCAAATGAAAAATTGATTTTGGAAGAGAAGTTATCCGTGCTTCAGAAGAGAACAGCCGACGAGGTTAGTTCTCTTCAACGGAAACTTGAGCAAGAACGTAAAGTTGTGAAGTCTCAAGTGCATGACTTGGAAAGAAAGCTAGAAGTGTTTAGACAAGACTTAGCGGCAGCTGAGTCTACTATTTCAGTCAAGACCTCTGAGTTGGCTGCATTGCAGAATAATTTGAAGGAACTAGAAGAGTTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAAACAGCTTCCATATTGAAGATGCAAGGGGCTCAACTAGCTGAAATGGAATTGCTTTATAAGGAAGAGCAGGTTTTAAGGAAACGTTATTTCAATACAATAGAAGATATGAAAGGCAAAATCAGAGTTTACTGCAGGCTAAGACCTCTTAATGAGAAAGAGATTTCCGAGAAAGAAAGAGGAGCTGTTACTAAGGTAGACGAGTTTACAGTTGAACATTCGTGGAAGGATGATAAACTGAAGCAGTACATATATGACCGTGTGTTTGGTGGCGATGCAACTCAAGAAAGTGTATTTGAGGATACAAGGTATTTGGTGCAATCTGCTGCAGATGGTTATAATGTCTGCATTTTTGCATATGGTCAGACTGGCTCGGGGAAGACATTTACAATCTATGGAAGTGAAAACAACCATGGGCTTACTCCTCGTGCTACTTCAGAACTTTTTAGAATTATAAGGAGAGATAGTAATAAGTATTCTTTTTCCTTGAAGGCTTACATGGTGGAATTATATCAAGACACCCTTATAGATCTTCTGTTACCTAAGAATGCAAAGCATTTAAAATTGGATATTAAGAAGGATTCAACGGGAATGGTAGCTGTGGAAAATGTAACAGTCCTGTCAATTTCTACCATAGAAGAATTGAATAGCATAATACAAAGAGGATCTGAACGGCGACATATATCAGGGACGCATATGAATGAAGAAAGTTCAAGATCTCATCTTATTCTATCAATTGTAATTGAAAGTACTAATCTCCAAAGTCAATCAGTTGCAAGGGGAAAGCTGAGTTTTGTGGATCTTGCCGGTTCAGAAAGAGTGAAAAAGTCGGGTTCAGCGGGTAGCCAACTCAAGGAAGCTCAAAGTATCAACAAATCGTTATCAGCGCTTGCGGATGTTATTAGTGCTTTGTCTTCTGGTGGTCAACACATACCCTACAGGAATCACAAGTTAACCATGTTAATGAGTGATTCACTTGGTGGTAATGCCAAAACACTCATGTTTGTGAATGTTTCTCCAGCAGAATCAAGCTTGGATGAGACACATAATTCTCTAATGTATGCATCAAGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCAAAAGAGATAGCTAGATTGAAGAAGTTGGTTGCATATTGGAAAGAACAAGCTGGTAGAAGAGGTGAAGATGAAGATTTAGAAGAAATTCAAGATGAAAGACCAACAAAAGTAGGTAAATAG 3795 0.3905 MIIDMPSSTAPNVRASRSSLSSSNGNEDIPVHNYATDNNGDDGYDSDSSNFAPPTSSTPSMAVPAELAGAVHLVDRFQVDGFVKMMQKQIQSAGKRGFFSKRSVGPQVREKFTFEDMLCFQKEPIPTSLLKINGDLVSRATKLFQMVLKYMGVDSSDHVTPVSFDERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPERQSLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVAHDVATDSDIQALALNTLNALKRSVKAGPRHVIPVREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSSFSLFECRKVVTGSKSPDPGSEEYVGLDDNKYIGDLLAEFKSAKDRSKGEILHCKLIFKKKLFRESDEAITDPMFVILSYVQLQHDYILGNYPIGRDDAAKLSALQILTEIGFVSTPESSTDWNSLLERFLPRQIAMTRAKREWELDILSRYHSLEHLTKDDARQQFLRILRALPYGSSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNIAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAASGSSNGDISNSFKPSNLELYEKRVQDLSKRIEDSQRSVDQLLEELHEKQIQEEKMQEELEGLKESFKADKQNLEEVTNDRDRLRSLCMEKDKALQAAILEKRNTEARMAKLNNLATENTPKKGLVGGNNQVFQKLEDELKLCKDKLHAAEETIKSLANEKLILEEKLSVLQKRTADEVSSLQRKLEQERKVVKSQVHDLERKLEVFRQDLAAAESTISVKTSELAALQNNLKELEELREMKEDIDRKNEQTASILKMQGAQLAEMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLNEKEISEKERGAVTKVDEFTVEHSWKDDKLKQYIYDRVFGGDATQESVFEDTRYLVQSAADGYNVCIFAYGQTGSGKTFTIYGSENNHGLTPRATSELFRIIRRDSNKYSFSLKAYMVELYQDTLIDLLLPKNAKHLKLDIKKDSTGMVAVENVTVLSISTIEELNSIIQRGSERRHISGTHMNEESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSAGSQLKEAQSINKSLSALADVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRGEDEDLEEIQDERPTKVGK* 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0072 1264 ProSiteProfiles MyTH4 domain profile. 120 279 IPR000857 GO:0005856
Lan18g0072 1264 ProSitePatterns Kinesin motor domain signature. 1115 1126 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan18g0072 1264 MobiDBLite consensus disorder prediction 1241 1264 - -
Lan18g0072 1264 Pfam MyTH4 domain 173 277 IPR000857 GO:0005856
Lan18g0072 1264 SUPERFAMILY Second domain of FERM 382 499 IPR035963 -
Lan18g0072 1264 PANTHER KINESIN-RELATED 615 1261 IPR027640 GO:0003777|GO:0007018
Lan18g0072 1264 CDD FERM_C_KCBP 502 609 - -
Lan18g0072 1264 Pfam Kinesin motor domain 900 1215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0072 1264 CDD FERM_B-lobe 401 497 IPR019748 -
Lan18g0072 1264 MobiDBLite consensus disorder prediction 9 59 - -
Lan18g0072 1264 Coils Coil 622 684 - -
Lan18g0072 1264 SMART B41_5 280 504 IPR019749 -
Lan18g0072 1264 Coils Coil 787 859 - -
Lan18g0072 1264 PRINTS Kinesin heavy chain signature 966 987 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0072 1264 PRINTS Kinesin heavy chain signature 1085 1102 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0072 1264 PRINTS Kinesin heavy chain signature 1116 1134 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0072 1264 PRINTS Kinesin heavy chain signature 1165 1186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0072 1264 Coils Coil 737 778 - -
Lan18g0072 1264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 894 1243 IPR027417 -
Lan18g0072 1264 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 615 1261 - -
Lan18g0072 1264 Gene3D Kinesin motor domain 833 1216 IPR036961 -
Lan18g0072 1264 Gene3D - 387 498 IPR014352 -
Lan18g0072 1264 Gene3D - 1218 1263 - -
Lan18g0072 1264 Gene3D MyTH4 domain 99 281 IPR038185 -
Lan18g0072 1264 Gene3D - 283 386 - -
Lan18g0072 1264 Pfam FERM central domain 390 504 IPR019748 -
Lan18g0072 1264 ProSiteProfiles FERM domain profile. 284 598 IPR000299 GO:0005856
Lan18g0072 1264 SUPERFAMILY Prismane protein-like 837 898 IPR011254 GO:0003824|GO:0016491
Lan18g0072 1264 Coils Coil 699 719 - -
Lan18g0072 1264 CDD KISc_C_terminal 892 1217 - -
Lan18g0072 1264 ProSiteProfiles Kinesin motor domain profile. 894 1215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0072 1264 SMART kinesin_4 892 1223 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0072 1264 MobiDBLite consensus disorder prediction 1 59 - -
Lan18g0072 1264 SUPERFAMILY PH domain-like 504 592 - -
Lan18g0072 1264 Gene3D - 500 611 IPR011993 -
Lan18g0072 1264 SMART MyTH4_1 120 279 IPR000857 GO:0005856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0072 Lan-Chr18 532602 541801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0072 55 1261 Calmodulin-binding Proteins AT5G65930 75.041 0.0 1866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0072 - - adu:107475586 2067.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0465 17 3531930 3540609 Lan18g0072 18 532602 541801 LSH