Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0069 ATGATGAATAACATGACTCCTTCACAAGATCCACCCCTTCACACCGATGACTATTTCCCTAACCCTATCCATCCACAACCTCGCCCTAACCCTCGCCGTCCCCGCGGTTTCGCCGCCACAGCAGCGGCCAACAACTCCGCCGGCAAGGGGAAGAAGGAGAGGGAGAAAGAGAAGGAACGTACTAAGCTCCGGGAACGTCACCGCCGTGCTATCACCAGCCGCATGCTCACCGGACTCCGTCAGTATGGCAATTTCCCTCTCCCGGCACGCGCTGATATGAACGATGTGCTCGCCGCACTTGCTCGTGAGGCTGGTTGGGTTGTGGAGGCTGATGGAACTACTTATAGGCAGTGTCCACCACCTTCTCAATTGGGATCATTTGAAGCAAGATCGGTTGAAAATCCACTCTCTGCTGGTTCTTTGAGAGCTTGCTCTGTTAAAGAAACACTAGAGAATCAGCCACATGCTTTTAGAATTGATGGAAGCTTGTCACCTACATCCATTGATTCGGATGTAATTGCGGAAAGGGATTCAAAGAATGCAAGTGCAAGCCCCATCAATTCAGTTGACTGCTTAGAGGCTGATCAGCTTTTGCAACATATTCATTCAGGGGTGAATGAGAATGACTTTACTGGCACACCATATGTTCCTGTTTACATAAAGCTTCCTGTTGGTATTATTAACAAATTTTGCCAATTGATTGATCCTGAAGGCATTAGGCAGGAGCTAATCCATATGAAGTCTTTAAATATAGATGGTGTCATTGTGGATTGTTGGTGGGGCATTGTTGAAGTCTGGAGCCCACAAAAATATGTGTGGTCTGGCTATAGGGAACTTTTTAATATTATTAGAGAATTCAAGCTGAAGTTGCAGGTTGTTATGGCATTTCATGAATGTGGAGGGAACGATTCTACTGATGCTTTGATTGCCCTCCCACAGTGGGTTTTAGAGATTGGAAAAGACAACAGAGATATATTCTTCACAGATCGTGAAGGACGAAGGAATACTGAATGCCTTTCTTGGGGCATTGACAAAGAGCGAGTTCTGAAAGGAAGAACTGGAATTGAGGTCTACTTTGACTTCATGAGAAGCTTTCGGACAGAGTTTGATGACTTGTTTGTAGAAGGTCTGATTTCTGCTGTAGAAATTGGACTTGGAGCATCTGGGGAACTGAAATACCCTTCTTTTTCGGAAAGGATGGGTTGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTACACAGAGCAGCCAAAGCTCGTGGTCACTCTTTCTGGGCTAGAGGACCGGATAATGCTGGAAACTACAATTCTATGCCACATGAAACTGGGTTCTTTTGTGATCGAGGAGATTATGACAACTATTATGGGCGTTTCTTCTTACATTGGTACTTCCAGACATTAATAGACCATGCAGATAATGTCTTGTCTCTTGCAAGCCTCGCGTTTGAGGAAACAAAAATAATTGTCAAGGTTCCTGCAGTATATTGGTGGTACAAGACCGCTAGTCATGCAGCAGAGCTGACAGCAGGATATCACAACCCGACGAATCAGGATGGTTACTCTCCTGTATTTGAGGTTCTAAGAAAACATGATGTTACCGTTAAATTCATCTGCTTAGGAGTTCAACTTTCTAGCCAGGAAGCTGATGAGTCATTGGCTGACCCAGAGGGTTTCAGTTGGCAGGTATTAAACTCAGCCTGGGATCGTGGGTTGATGACGGCTGGAGAGAATGCACTCCCATGCTATGATAGAGAAGGTTACAAGAGATTGGTTGAGATGGCAAAGCCCAGGAATGATCCCGACCGTCGACATTTTTCATTCTTTGTATACCAACAACCATCTTTGCTTCAGGGGAATGTTTGTTTGACAGAGTTGGATTTCTTCATCAAATGCTTGCACGGTGAAATGGCAGGAGATTTGTAA 1947 0.4504 MMNNMTPSQDPPLHTDDYFPNPIHPQPRPNPRRPRGFAATAAANNSAGKGKKEREKEKERTKLRERHRRAITSRMLTGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCPPPSQLGSFEARSVENPLSAGSLRACSVKETLENQPHAFRIDGSLSPTSIDSDVIAERDSKNASASPINSVDCLEADQLLQHIHSGVNENDFTGTPYVPVYIKLPVGIINKFCQLIDPEGIRQELIHMKSLNIDGVIVDCWWGIVEVWSPQKYVWSGYRELFNIIREFKLKLQVVMAFHECGGNDSTDALIALPQWVLEIGKDNRDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDFMRSFRTEFDDLFVEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLHRAAKARGHSFWARGPDNAGNYNSMPHETGFFCDRGDYDNYYGRFFLHWYFQTLIDHADNVLSLASLAFEETKIIVKVPAVYWWYKTASHAAELTAGYHNPTNQDGYSPVFEVLRKHDVTVKFICLGVQLSSQEADESLADPEGFSWQVLNSAWDRGLMTAGENALPCYDREGYKRLVEMAKPRNDPDRRHFSFFVYQQPSLLQGNVCLTELDFFIKCLHGEMAGDL* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0069 648 Gene3D Glycosidases 206 647 - -
Lan18g0069 648 MobiDBLite consensus disorder prediction 48 65 - -
Lan18g0069 648 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 250 264 IPR001554 GO:0000272|GO:0016161
Lan18g0069 648 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 271 289 IPR001554 GO:0000272|GO:0016161
Lan18g0069 648 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 293 314 IPR001554 GO:0000272|GO:0016161
Lan18g0069 648 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 386 408 IPR001554 GO:0000272|GO:0016161
Lan18g0069 648 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 459 478 IPR001554 GO:0000272|GO:0016161
Lan18g0069 648 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 493 509 IPR001554 GO:0000272|GO:0016161
Lan18g0069 648 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 510 521 IPR001554 GO:0000272|GO:0016161
Lan18g0069 648 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 528 551 IPR001554 GO:0000272|GO:0016161
Lan18g0069 648 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 566 588 IPR001554 GO:0000272|GO:0016161
Lan18g0069 648 SUPERFAMILY (Trans)glycosidases 210 643 IPR017853 -
Lan18g0069 648 PANTHER BETA-AMYLASE 8 53 647 - -
Lan18g0069 648 PANTHER - 53 647 IPR001554 GO:0000272|GO:0016161
Lan18g0069 648 MobiDBLite consensus disorder prediction 1 65 - -
Lan18g0069 648 Pfam BES1/BZR1 plant transcription factor, N-terminal 48 191 IPR008540 -
Lan18g0069 648 Pfam Glycosyl hydrolase family 14 234 614 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0069 Lan-Chr18 506738 513095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0069 8 644 Glycoside Hydrolase AT5G45300 66.024 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lan18g0069 Glyco_hydro_14 1.5e-87 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0069 K01177 - gmx:100777004 1109.36