Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0063 ATGGCTCGTTCTGCTCCTATTGTTTTCACTATTTTCTTCTTTGTTATAGTTCTTCTTGCCAGTGTGGCAGAAGCAAGGACTTGTTTGTCTGAAAGCAAAGGCTTCACAGGATTATGTTGGAAAAATGCCAATTGTTCTCGTGTTTGCAAGAGTGAGAAATTCTCTGGAGGGTATTGTAGTGGCTTTCAATGTCTCTGTACCAGAAATTGTCCTAAAGATTCTAAAAATAATGGACCCCCGCCCCCAAATCAAGATGGTGAACCCACCACCCCATCCCCAAATCTCGTTGATGAATCCACCACCGCCGCACCCTCCAAATCACATTGA 327 0.4373 MARSAPIVFTIFFFVIVLLASVAEARTCLSESKGFTGLCWKNANCSRVCKSEKFSGGYCSGFQCLCTRNCPKDSKNNGPPPPNQDGEPTTPSPNLVDESTTAAPSKSH* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0063 108 MobiDBLite consensus disorder prediction 89 108 - -
Lan18g0063 108 SUPERFAMILY Scorpion toxin-like 26 70 IPR036574 -
Lan18g0063 108 Pfam Gamma-thionin family 26 70 - -
Lan18g0063 108 Gene3D - 21 79 IPR036574 -
Lan18g0063 108 PANTHER DEFENSIN-LIKE PROTEIN 6 3 70 - -
Lan18g0063 108 ProSitePatterns Gamma-thionins family signature. 26 49 IPR008176 GO:0006952
Lan18g0063 108 SMART gth_4 27 70 IPR003614 GO:0006952
Lan18g0063 108 PANTHER DEFENSIN-LIKE PROTEIN 1 3 70 - -
Lan18g0063 108 MobiDBLite consensus disorder prediction 74 108 - -
Lan18g0063 108 CDD Knot1 37 67 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0063 Lan-Chr18 457224 458051 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0063 1 70 Plant Defensins Gene Families AT2G02120 41.558 3.59e-14 60.8