Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0060 ATGGCTCGTTCTGCTCCTATTGTTTTCACTATTTTCTTTTTTGTTATAGTTCTTCTTGCCAATGAAATGGGGCCAGCATTAGTGGCAGAAGCAGGGACTTGTTTGTCTAAAAGCAAACACTTCGTAGGATCATGTTGGAGAAATGCCAATTGTGCTGGTGCTTGCAAGAGTGAGAAATTCTTCGGAGGGCATTGTAAAGGCTTTCAATGCCTTTGTACCACAAAATGTCCTAAAGATTCTAAAAATAATGGACCCCCACCGCCGAATCAAGATGGTGAACGCACCCCACCCCCAAATCAAGATGATCAATCCACCACCCCCCACACCACCAAATCAAGTTGA 342 0.4386 MARSAPIVFTIFFFVIVLLANEMGPALVAEAGTCLSKSKHFVGSCWRNANCAGACKSEKFFGGHCKGFQCLCTTKCPKDSKNNGPPPPNQDGERTPPPNQDDQSTTPHTTKSS* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0060 113 SMART gth_4 33 76 IPR003614 GO:0006952
Lan18g0060 113 MobiDBLite consensus disorder prediction 77 113 - -
Lan18g0060 113 MobiDBLite consensus disorder prediction 95 113 - -
Lan18g0060 113 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Lan18g0060 113 SUPERFAMILY Scorpion toxin-like 33 76 IPR036574 -
Lan18g0060 113 Pfam Gamma-thionin family 33 76 - -
Lan18g0060 113 PANTHER DEFENSIN-LIKE PROTEIN P322 1 76 - -
Lan18g0060 113 PANTHER DEFENSIN-LIKE PROTEIN 1 1 76 - -
Lan18g0060 113 CDD Knot1 43 73 IPR003614 GO:0006952
Lan18g0060 113 Gene3D - 27 85 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0060 Lan-Chr18 432743 433611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0060 1 76 Plant Defensins Gene Families AT2G02120 41.026 3.95e-14 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0060 - - lang:109332701 174.481