Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0058 ATGGAGAAACTGAACTTATCTGCTAATTATGATCTTGATGCCAGCATGGACCGGTCGGGTTCATTTCGTGTATTCGAACCATCGGAGAGGCAGGATGTTGGACAGGAAAGCAGTAGAAGAGAGCAAAATGATACAGAAGATGTAAGATTTGATGGACAATTGATAACTGCTTCCTCTAATTCTGGAAGCAGGAGGGGTGAATCTGTCAACAAGTGGATGGCATTTGCTATGGCGCCCAAAATTGATGATCGAAACTCTTCAGCGAAGTTTATTTCCGGGGATGAAAATATAACGAAAGACAACAACTTGAGGACTAATCAAAATGGGAAGTCATCTTCCGGTCATCGTCAAATTTTAACTGAAGAAAGCATAGATGAGAGAACTGATGAGTGGGGTATTGTGGTGAACTCGGAGAGTTTTAAGACAACTGCTTCCTCTTTTGATGGTGATAGGATCAAAAAATTATCCAATAGATTCGGTGAATCGGCAAGGACATCCGGGGAATCAAATTACGAGTCCGAGTCATCATCAGGGGTGATCCCAAGGGTCTCACAAGAGTTGAAGAATGCATTGGCTACGCTACAACAGACATTTGTCGTCTCAGATGCAACGAAGCCGGACTGTCCAATCATGTATGCCAGCAGTGGCTTTTTTAGTATGACCGGTTATTCGTCGAAGGAGATTATTGGAAGGAACTGCCGATTTCTTCAGGGGGCGGATACAGATACGAATGAAGTGGCGAAAATTCGGGATGCAACTAGAAATGGGAAAAGTTATTGTGGCAGGCTTTTAAATTACAAGAAAGATGGAACTCCGTTCTGGAATCTTCTCACTATCACTCCCATCAAAGATGATAATGGCAATACAATCAAATTCATAGGAATGCAGGTTGAAGTGAGCAAGTACACTGAAGGTCTGAATGAAAAGGCGTTACGGCCAAATGGATTGCCGAAATCATTAATTCGTTATGATGCTCGTCAGAAGGAGACAGCTCTGTGTTCCATGACCGAGGTGGTCCAAACTGTTAAGGATCCAAAATCCGTTGTTCGGGCTAGGAATGATGATACTTCCAACAACCTTGTAGAGCAAGACAAGGTCAATGTTGATTTTGTTTTGCCGAAGTCTGTTGAAACAAGGAATACAAGTACACCTGGTAGAAAACCTTCTTCAACTAACATCCAAAGTGATGTATCACGCCTGAGTTCTACTCAGGATAGGAAGAGCAAGTCATCAAGAAAATCAGGACGGAATTCCTCCACGAGTTTCAAACGGAAATCTCTGAGTTCTGCCAGGGGAGAGGAAGAGACACCAATTGTTGAACCAGAGGTTTTGATGACTAAGGAAATAGAGCGGTCTGACAGCTCGGAGCGTTCGCAAAGAGAAAGAGATATAAGGCAGGGAATTGATTTAGCAACAACATTGGAGCGTATAGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCCGATAACCCGATTATATTTGCATCCGATAGCTTTCTTGAACTTACAGAATATACCCGAGAAGAAATTTTGGGACGAAACTGTCGGTTTCTTCAAGGACCGGAAACAGATATGTCGACCGTCGATAAGATTAGAGATGCTATCAAAGAGCAGAGGGAGATCACTGTTCAATTGATCAACTATACCAAGAGTGGAAAGAAGTTCTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTTCAATTAGACGGAAGCGATCACGTAGAACCCTTACAAAATCGTCTGTCCGAAAGAGCTGAGCTACAAAGTACTAAGTTGGTTAAAGCTACTGCAGAAAACGTTGATGGAGCTGTCCGAGAACTTCCGGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTCAACCTGTATTTCCACTACCCCACAAAAGGGACAATCCTTCTTGGGTAGCAATACAAAAGATAGCTGCAAGAGACGGAAAGATTGGCTTGCACAATTTTTCACCGATAAGGCCATTGGGTTGCGGAGATACTGGCAGTGTTCATTTGGTGGAACTCCAAGGTACGGGCGAACTATATGCAATGAAGGCAATGGAAAAATCTGTAATGCTAAATCGTAATAAGGTTCACCGTGCATGCATCGAGAGAGAGATCATATCATTACTTGATCATCCTTTTCTTCCAACACTATACACTTCATTTCAGACTTCTACACATGTATGTTTGATTACTGATTTCTGCCAAGGGGGAGAGTTGTTTGCCTTGCTCGACAAGCAACCCATGAAACTCTTTAACGAAGAATCGACGAGATTCTATGCAGCAGAGGTTATCATTGGTTTGGAATATCTCCACTGTTTAGGTATAATTTATCGAGACTTGAAGCCTGAAAATATCTTACTTCAGAAGGATGGACATGTTGTATTGACTGATTTCGATCTATCATTCATGACACCTTGTAAACCCCAGGTAGTGAAACAGCCACTACCTAGCAATAGAAGAAAATCGCGGAGTCAACCTCTACCAACCTTAGTTGCAGAGCCAGTTGCGCAATCAAACTCATTTGTCGGCACTGAAGAGTACATAGCTCCTGAAATTATAACTGGAGCTGGGCATACTAGTGCTATAGATTGGTGGACCCTCGGTATCTTGCTGTATGAGATGCTCTATGGTCGTACACCGTTTCGAGGAAAGAATAGACAGAAGACATTTTCCAACATCTTACACAAGGATCTTACCTTTCCGAGCAGTATCCCGGCAAGTCTGCAAGCCAGGCAATTGATTAATGCACTATTGCAAAGAGATCCGGGCAGTCGTCTAGGCTCGAAGGCCGGATCCAGTGAAATCAAACAACATCCGTTTTTTCGCGGAATCAATTGGCCTTTAATCCGCAACGTGAGTCCACCTCCATTAGAAGTTCCTCTTGAATTGATAGGGAAAGATTCAATAGCCAAGGATGTGAAGTGGGAAGATGATGGTGTGCTTGTTAACAAGCTTGATGATATGGAGATTTTTTGA 3015 0.4265 MEKLNLSANYDLDASMDRSGSFRVFEPSERQDVGQESSRREQNDTEDVRFDGQLITASSNSGSRRGESVNKWMAFAMAPKIDDRNSSAKFISGDENITKDNNLRTNQNGKSSSGHRQILTEESIDERTDEWGIVVNSESFKTTASSFDGDRIKKLSNRFGESARTSGESNYESESSSGVIPRVSQELKNALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEIIGRNCRFLQGADTDTNEVAKIRDATRNGKSYCGRLLNYKKDGTPFWNLLTITPIKDDNGNTIKFIGMQVEVSKYTEGLNEKALRPNGLPKSLIRYDARQKETALCSMTEVVQTVKDPKSVVRARNDDTSNNLVEQDKVNVDFVLPKSVETRNTSTPGRKPSSTNIQSDVSRLSSTQDRKSKSSRKSGRNSSTSFKRKSLSSARGEEETPIVEPEVLMTKEIERSDSSERSQRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDMSTVDKIRDAIKEQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLQNRLSERAELQSTKLVKATAENVDGAVRELPDANLRPEDLWAIHSQPVFPLPHKRDNPSWVAIQKIAARDGKIGLHNFSPIRPLGCGDTGSVHLVELQGTGELYAMKAMEKSVMLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTSTHVCLITDFCQGGELFALLDKQPMKLFNEESTRFYAAEVIIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTPCKPQVVKQPLPSNRRKSRSQPLPTLVAEPVAQSNSFVGTEEYIAPEIITGAGHTSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLQARQLINALLQRDPGSRLGSKAGSSEIKQHPFFRGINWPLIRNVSPPPLEVPLELIGKDSIAKDVKWEDDGVLVNKLDDMEIF* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0058 1004 ProSitePatterns Protein kinases ATP-binding region signature. 673 696 IPR017441 GO:0005524
Lan18g0058 1004 ProSiteProfiles PAC domain profile. 540 594 IPR000700 -
Lan18g0058 1004 MobiDBLite consensus disorder prediction 374 401 - -
Lan18g0058 1004 SUPERFAMILY Protein kinase-like (PK-like) 643 980 IPR011009 -
Lan18g0058 1004 Pfam PAS domain 489 581 IPR000014 -
Lan18g0058 1004 Pfam PAS domain 204 300 IPR000014 -
Lan18g0058 1004 CDD PAS 210 299 IPR000014 -
Lan18g0058 1004 MobiDBLite consensus disorder prediction 97 123 - -
Lan18g0058 1004 MobiDBLite consensus disorder prediction 97 118 - -
Lan18g0058 1004 ProSiteProfiles PAS repeat profile. 466 539 IPR000014 -
Lan18g0058 1004 SMART pac_2 543 585 IPR001610 -
Lan18g0058 1004 SMART pac_2 260 302 IPR001610 -
Lan18g0058 1004 PANTHER FLIPPASE KINASE 1-RELATED 141 395 - -
Lan18g0058 1004 PANTHER FLIPPASE KINASE 1-RELATED 402 1000 - -
Lan18g0058 1004 MobiDBLite consensus disorder prediction 52 66 - -
Lan18g0058 1004 SUPERFAMILY PYP-like sensor domain (PAS domain) 204 296 IPR035965 -
Lan18g0058 1004 SMART pas_2 468 537 IPR000014 -
Lan18g0058 1004 SMART pas_2 185 254 IPR000014 -
Lan18g0058 1004 MobiDBLite consensus disorder prediction 372 464 - -
Lan18g0058 1004 CDD STKc_phototropin_like 665 977 - -
Lan18g0058 1004 CDD PAS 489 581 IPR000014 -
Lan18g0058 1004 TIGRFAM sensory_box: PAS domain S-box protein 492 584 IPR000014 -
Lan18g0058 1004 TIGRFAM sensory_box: PAS domain S-box protein 210 300 IPR000014 -
Lan18g0058 1004 ProSiteProfiles PAS repeat profile. 183 256 IPR000014 -
Lan18g0058 1004 Gene3D PAS domain 454 619 - -
Lan18g0058 1004 PANTHER BNAA02G07840D PROTEIN 141 395 - -
Lan18g0058 1004 PANTHER BNAA02G07840D PROTEIN 402 1000 - -
Lan18g0058 1004 MobiDBLite consensus disorder prediction 23 48 - -
Lan18g0058 1004 MobiDBLite consensus disorder prediction 427 464 - -
Lan18g0058 1004 Pfam Protein kinase domain 670 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0058 1004 ProSiteProfiles PAC domain profile. 257 311 IPR000700 -
Lan18g0058 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Lan18g0058 1004 SUPERFAMILY PYP-like sensor domain (PAS domain) 485 581 IPR035965 -
Lan18g0058 1004 ProSiteProfiles Protein kinase domain profile. 667 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0058 1004 Gene3D PAS domain 197 364 - -
Lan18g0058 1004 MobiDBLite consensus disorder prediction 22 66 - -
Lan18g0058 1004 SMART serkin_6 667 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0058 1004 Gene3D Transferase(Phosphotransferase) domain 1 751 968 - -
Lan18g0058 1004 Gene3D Phosphorylase Kinase; domain 1 666 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0058 Lan-Chr18 410194 418971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0058 86 1004 AGC Kinase Gene Family AT5G58140 71.073 0.0 1300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan18g0058 Pkinase 7.1e-60 CL0016