Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0052 ATGGGATTCCGGTTACCTGGTATTATTAGAAGGGCTTCATTCCAAGCAGCTTCCAAGGCTGTGGAAGTTCCAAAAGGATATCTTGCAGTCTATGTTGGAGAAAACATGAAGCGGTTTGTAATTCCAATCTCATACTTGAGTCAACCTTCATTTCAAGAATTACTAAACCAAGCCGAAGACGAATTTGGATATGATCATCCTACGGGTGGTCTCACGATTCCTTGCAGGGAGGATGCTTTCTTAGACCTCATTTCATACTTGACCAGACTGTAA 273 0.4212 MGFRLPGIIRRASFQAASKAVEVPKGYLAVYVGENMKRFVIPISYLSQPSFQELLNQAEDEFGYDHPTGGLTIPCREDAFLDLISYLTRL* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0052 90 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 88 - -
Lan18g0052 90 Pfam Auxin responsive protein 15 87 IPR003676 GO:0009733
Lan18g0052 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0052 Lan-Chr18 371937 372449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0052 10 80 Calmodulin-binding Proteins AT3G43120 47.887 2.18e-19 75.5