Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0050 ATGTTACATTCAATTCAAATTCTTGCTGATATGACATTTCTGCATGTGTTGCTCTTTCTGGGATTCTTGTGGGCTGAAATTCATGGCATCTCTTCATTTACTGATCCTCAAGATGCTAGTGTACTTCAATCTTTAAAGGATATATGGCAAAATACACCACCTAGTTGGGACAAATCAAATGATCCTTGTGGCTCACCATGGGAAGGAGTTGCCTGCAACAAATCAAGAGTTACTTCATTGGGATTATCAACTATGGGCCTTAAGGGTAAATTGAGTGGAGACATTGGTGGACTCACAGAACTAAGATCCTTGGACTTATCATTCAACAGAGGTTTAACTGGTCCTCTTTCTCCACAATTAGGAGACTTAAGCAAGCTAAATATTCTGATTTTGGCTGGTTGTAGTTTCAATGGCAACATTCCAGATGCATTAGGAAATCTTTCAGAGCTATCTTTCCTGGCTTTAAATTCAAACAACTTCACTGGAAAAGTACCTCCTTCATTGGGTAAACTCTCCAAAGTTTACTGGCTGGACTTGGCAGATAATCAGCTTACTGGTCCTATTCCGGTTTCAACCTCCACCACCCCTGGATTAGACCTTCTTTTAAAGGCTAAGCATTTCCATTTCAATAAGAACAAGCTTTCAGGTCCAATTCCTACCGAACTTTTCAGCTCTGATATGGTACTCATACACATATTATTTGATGGAAATAGTTTTACCGGGAGTATACCTTCGACTATAGGACTCGTTCAAACACTTGAAGTTCTTCGGCTCGATAGAAATTTCTTGACAGGAGAGGTTCCATCAAATCTCAATAACCTTACAAACATCAATGAATTGAATTTGGCTCACAATAATTTGACAGGTCCTTTGCCAGATTTGAGTCAAATGGATGCCCTCAACTATGTGGATCTAAGTAACAACTCTTTTGATCCATCTGAAGCTCCAACTTGGTTCTCAACTCTAGCATCACTCACCACTCTTGTTATGGAGTTCGGATCGCTGCAAGGTTCTCTTCCACCGAAACTCTTCAGCATTCCTCAAATACAGCAAGTGAAACTCCGAAGCAATGCGCTAAACAATACGTTGGACATGGGTGACAGCATTTGTCCTCAGTTGCAGCTAGTAGATTTGCAAGACAACCAAATTTCCTCAGTAACACTCAGTTCACAGTACAAAAAAACTCTAATTCTTATCGGAAATCCAGTGTGCACTACCGGTCTCTCGAATACTAATTACTGCCAACTTCAGCAACAGCCTAAACAACCCTACTCCACCAGCTTGGCTAATTGTGGAGGCAGATCTTGTCCCCCGGATCAAAAGCTCAGCCCGCAAAGTTGCGAATGTGCCTATCCGTATCAAGGAATGTTGTACTTCCGAGGACCCTTGTTCAGAGAACTATCAAATGTAAACACTTTTCATTCACTTGAAATGAGCCTATGGGTGAAATTGGGTTTAACACCTGGCTCGGTTTCTTTACAAAACCCCTTCTTCAACGGCGACGATTATCTTCAAGTACAATTAGCACTCTTTCCTCCAATAGGGCAATATTTTAATAGGTCAGAAGTTCAAAGAATTGGATTTCAATTGAGTAATCAAACTTACAAGCCTCCGCACGAGTTTGGACCCTATTACTTCATTGCATTTCCTTATGCTTTCCCAGATTCCAACAGAGGAAGTTCTCTTAGCAGAAGTGTTGTTATCGGGATAGCGAGCAGCTGCACTTTTCTGGTTCTGAGCCTCATAGGGTTAGGAATATATGCGATTTTGCAAAAGAAGCGTGCCGAGAAAGCCATCGGATTAAGCAGACCTTTTGCATCCTGGGCACCAAGTGGCAAGGATAGTGGAGGTGCACCGCAATTGAAGGGAGCAAGGTGGTTCTCTTATGATGAACTCAAAAAGTACACCAGTAATTTCTCTGCAAGAAATGAGATAGGATTCGGAGGCTATGGCAAGGTGTACAAAGGGGTGCTCCCTGATGGAAAAATCGTTGCAATAAAACGAGCTCAGCAAGGATCAACGCAAGGAGGACTCGAGTTCAAGAACGAAATTGAGTTACTTTCAAGAGTTCACCACAAGAACCTTGTTGGCCTTGTAGGATTTTGCTTCGAACAAGGAGAACAAATGTTGGTTTACGAGTTTATGCCCAACGGAACACTTCGGGAGAGTTTATCAGGGAGAAATGACATCCATCTTGACTGGAAGAGGAGACTCCGCGTTGCTCTCGGCTCGGCCAGAGGACTTGCATACTTACACGAACTTGCCAACCCTCCGATAATCCACAGAGATGTAAAGTCCACTAATATTTTACTGGATGAGAATTTGACAGCAAAGGTTGCAGATTTCGGCTTGTCTAAGCTAGTATCAGAGAGTGAGAAAGAGCATGTTTCTACTCAGGTTAAAGGGACATTGGGCTATCTCGATCCGGAATACTACATGACCCAACAACTAACAGAAAAGAGTGATGTATACAGTTTCGGGGTAGTTATGCTCGAACTGATAACTTCCAGACAACCTATTGAGAAGGGCAAATACATTGTCCGGGAGGTGCGAACCGCGATGAATAAGTACGATGAAGAACATTACGGCTTGAGGGTACTCATGGATCCAGTGGTCAGAAACACACCAAACCTCATAGGATTTGGAAGGTTCCTAGAGTTGACAATGCAATGTGTGGAGGACTCGGCCTCGGACCGACCAACAATGAGTGAAGTTGTGAAAACACTTGAAACCATTTTACAGAATGATGGTATGAACACAAACTCTACTTCTGCATCATCATCTGCTACAGAATTTGGAATTCCTAAGGGTGCTGCAATGAGACATCCTTATATTGATGCTACTTTTACTAAGAAGGAGAATGATATTAATGAAAGCAATGCTTTTGATTACAGTGGTGGCTATACACTTTCAGCAATAGTTGAACCAAAATAG 2934 0.4213 MLHSIQILADMTFLHVLLFLGFLWAEIHGISSFTDPQDASVLQSLKDIWQNTPPSWDKSNDPCGSPWEGVACNKSRVTSLGLSTMGLKGKLSGDIGGLTELRSLDLSFNRGLTGPLSPQLGDLSKLNILILAGCSFNGNIPDALGNLSELSFLALNSNNFTGKVPPSLGKLSKVYWLDLADNQLTGPIPVSTSTTPGLDLLLKAKHFHFNKNKLSGPIPTELFSSDMVLIHILFDGNSFTGSIPSTIGLVQTLEVLRLDRNFLTGEVPSNLNNLTNINELNLAHNNLTGPLPDLSQMDALNYVDLSNNSFDPSEAPTWFSTLASLTTLVMEFGSLQGSLPPKLFSIPQIQQVKLRSNALNNTLDMGDSICPQLQLVDLQDNQISSVTLSSQYKKTLILIGNPVCTTGLSNTNYCQLQQQPKQPYSTSLANCGGRSCPPDQKLSPQSCECAYPYQGMLYFRGPLFRELSNVNTFHSLEMSLWVKLGLTPGSVSLQNPFFNGDDYLQVQLALFPPIGQYFNRSEVQRIGFQLSNQTYKPPHEFGPYYFIAFPYAFPDSNRGSSLSRSVVIGIASSCTFLVLSLIGLGIYAILQKKRAEKAIGLSRPFASWAPSGKDSGGAPQLKGARWFSYDELKKYTSNFSARNEIGFGGYGKVYKGVLPDGKIVAIKRAQQGSTQGGLEFKNEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGRNDIHLDWKRRLRVALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSESEKEHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITSRQPIEKGKYIVREVRTAMNKYDEEHYGLRVLMDPVVRNTPNLIGFGRFLELTMQCVEDSASDRPTMSEVVKTLETILQNDGMNTNSTSASSSATEFGIPKGAAMRHPYIDATFTKKENDINESNAFDYSGGYTLSAIVEPK* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0050 977 Gene3D Ribonuclease Inhibitor 37 194 IPR032675 -
Lan18g0050 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 759 771 IPR008271 GO:0004672|GO:0006468
Lan18g0050 977 Gene3D Ribonuclease Inhibitor 195 295 IPR032675 -
Lan18g0050 977 SUPERFAMILY Protein kinase-like (PK-like) 624 921 IPR011009 -
Lan18g0050 977 Gene3D Phosphorylase Kinase; domain 1 613 714 - -
Lan18g0050 977 Pfam Protein tyrosine and serine/threonine kinase 642 909 IPR001245 GO:0004672|GO:0006468
Lan18g0050 977 CDD STKc_IRAK 645 912 - -
Lan18g0050 977 Gene3D Ribonuclease Inhibitor 343 419 IPR032675 -
Lan18g0050 977 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 943 - -
Lan18g0050 977 ProSitePatterns Protein kinases ATP-binding region signature. 645 667 IPR017441 GO:0005524
Lan18g0050 977 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Lan18g0050 977 Gene3D Transferase(Phosphotransferase) domain 1 715 932 - -
Lan18g0050 977 PANTHER LRR RECEPTOR-LIKE KINASE 11 943 - -
Lan18g0050 977 SMART serkin_6 639 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0050 977 Gene3D Ribonuclease Inhibitor 296 342 IPR032675 -
Lan18g0050 977 ProSiteProfiles Protein kinase domain profile. 639 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0050 977 SUPERFAMILY L domain-like 48 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0050 Lan-Chr18 348271 354913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0050 16 977 Receptor kinase-like Gene Family AT1G79620 71.746 0.0 1437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lan18g0050 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0050 - - gmx:100792249 1690.63