Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0048 ATGGAAGACATGGCTAAGGATCTTACAGCTGGGACTGTTGGAGGGGCAGCACAATTGATATGTGGGCACCCCTTTGACACCATCAAGGTCAAGCTCCAAAGTCAGCCTGCACCACTCGCCGGTCGGCTTCCCATGTATTCTGGTGCAATTGATGCTGTCAAGCAGACAATAGCAGCCGAAGGCTCGACGGGTTTATACAAAGGTATGGGTGCCCCACTTGCTACAGTAGCACTCTTCAATGCTGTGCTGTTTACAGTGAGGGGACAATTGGAAACATTATTGAGGTCCCATCCTGGTGCCCCTCTCACAGTGAGTCAGCAGTTTGTTTGTGGAGCTGGAGCTGGACTTGCTGTTTCGTTTCTCGCTTGCCCCACCGAACTCATCAAATGCAGGTTGCAAGCACAAGGTGCGCTTGCCGGCACAGCAGCAGCTTCTGTTGGTGTGAAGTATGGAGGCCCCCTAGATGTGGCCAGGCATGTTCTTAGATCCGAAGGGGGAACCAAAGGTCTTTTCAAGGGCTTGATTCCCACTATGGCACGTGAGATACCCGGAAATGCTATAATGTTCGGTGTATACGAAGCAGTAAAACAAATGATTGCAGGAGGCACTGATACTTCTGGACTAGGTAGAGGTTCTCAGATTGTTGCTGGAGGCGTGGCTGGAGGTTCATTCTGGTTCTTAGTTTACCCAACTGATGTTGTCAAGAGTGTCCTTCAAGTAGACAATTACAAAAATCCCAGGTTTTCTGGTTCATTAGATGCTTTTAGAAAGATTAAAGCTTCAGAGGGGTTCAAAGGCTTGTATAAGGGTTTTGGTCCTGCAATGGGTCGAAGCATTCCGGCAAACGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGGATGA 894 0.4899 MEDMAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPAPLAGRLPMYSGAIDAVKQTIAAEGSTGLYKGMGAPLATVALFNAVLFTVRGQLETLLRSHPGAPLTVSQQFVCGAGAGLAVSFLACPTELIKCRLQAQGALAGTAAASVGVKYGGPLDVARHVLRSEGGTKGLFKGLIPTMAREIPGNAIMFGVYEAVKQMIAGGTDTSGLGRGSQIVAGGVAGGSFWFLVYPTDVVKSVLQVDNYKNPRFSGSLDAFRKIKASEGFKGLYKGFGPAMGRSIPANAACFLAYEMTRSALG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0048 297 Gene3D Mitochondrial carrier domain 1 296 IPR023395 -
Lan18g0048 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Lan18g0048 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Lan18g0048 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Lan18g0048 297 Pfam Mitochondrial carrier protein 212 296 IPR018108 -
Lan18g0048 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Lan18g0048 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Lan18g0048 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Lan18g0048 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Lan18g0048 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0048 Lan-Chr18 322477 324107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0048 2 84 Antiporters AT1G79900 27.711 7.15e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0048 K15109 - gmx:100787304 507.294