Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0044 ATGGCTTCTCTTGGAAATCCAAGAACTTGGATTCCATATATGAACACCAACAATTGTTCTCAAGAATCTTGTAGCTTTTATTGTCCACAATGGTGTTATACAACTCATTCTCATTCTCATTCTCATTCTCCTCTACCACAACCCTTTCAATATCATGATTCAAACCCAAAATTCTCACCTCTTATTATTTCAATCATTGGGGTCATATCCATTGTTATTCTTCTTCTAAGTTACTATACTATAATGTCCAAATACTATTCCAATAGAGAGAATAACCATGACCCAAATGATGAATTATTACAACACAATAATCACATTCATAATTTGCATGTTTCAACTTCAACCACTACTACTACTACTAGAGGATTAGATGAGAATCTTATAAAGTCTATTATGATTTGTAAGTACAAAAAAGGAAATAATAATAATGATGGGTTTGTTGGATTCATTGATTGTTCAGTTTGTCTAAGTGAGTTTGAAGATGATGAAAGTGTTAGAGTGTTACCAAAGTGTGACCATGTTTTTCATATTCCTTGCATTGATGCATGGCTCAAATCTCATTCAACTTGTCCTCTTTGTCGTGCTAACATATTCAACTTCAATGCTTCACCACTTCAAGCTTCATCATCAGTGGTCATAGAAATGGTCCATTCAAGGAATCAAATGTTGTCAGAAAATCAACATGCAGGTGAAAACATAATTGTTGAAAGTGACACTGAAATTGGTGCGGTGGAAGGAGAAACTACACATATCACTAGTCATCCTTCAAAGCGTGCTTTTAGTGATTTGGGTACTTTTCAACAAAGGCATACAATAATTCAGATTAGAGATGAACTTTTTAAATCAATTAGGTCAATTTCTATGGATCATTCACTTGCATAA 882 0.3356 MASLGNPRTWIPYMNTNNCSQESCSFYCPQWCYTTHSHSHSHSPLPQPFQYHDSNPKFSPLIISIIGVISIVILLLSYYTIMSKYYSNRENNHDPNDELLQHNNHIHNLHVSTSTTTTTTRGLDENLIKSIMICKYKKGNNNNDGFVGFIDCSVCLSEFEDDESVRVLPKCDHVFHIPCIDAWLKSHSTCPLCRANIFNFNASPLQASSSVVIEMVHSRNQMLSENQHAGENIIVESDTEIGAVEGETTHITSHPSKRAFSDLGTFQQRHTIIQIRDELFKSIRSISMDHSLA* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0044 293 Pfam Ring finger domain 151 194 IPR001841 -
Lan18g0044 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 199 IPR013083 -
Lan18g0044 293 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 1 291 IPR044675 -
Lan18g0044 293 ProSiteProfiles Zinc finger RING-type profile. 152 194 IPR001841 -
Lan18g0044 293 CDD RING-H2_PA-TM-RING 151 194 - -
Lan18g0044 293 SUPERFAMILY RING/U-box 129 199 - -
Lan18g0044 293 SMART ring_2 152 193 IPR001841 -
Lan18g0044 293 PANTHER RING-H2 FINGER PROTEIN ATL53-RELATED 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0044 Lan-Chr18 306887 309126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0044 6 258 C3H Transcription Factor Family AT5G17600 41.045 1.95e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0044 - - lang:109332637 570.466