Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0037 ATGGAAGAGGGAACTCATGTAACCCTAACTCTTCTTTTTTTTGAACACAAGAAGATATGCTTTGGTGACTATGAATCTAATGGTTTATTTGATCATAATATTGAGCTAAGTGATGAAATTGTTGGACTAATGGTGCAGAAGGAAGAAGAACATTTACCTAGAGATGATTACTTCGAGAATCTTCATGCTGGACACTTTAACTTGAGTGTTAGAAAACAAGCACTGGATTGGATGATGAAGGCACATGCTTATTTTGGTTTTGGACCATGGAGCATTTTTCTATCTGTCAACTATTTGGATAGGTTCCTATCACTCTTTGAATTGCCAAGAGACAAAAATTGGATTTCGCAATTGGTAGCAGTATCTTGTTTATCAATTGCTGCTAAAATTAGGGAGACTAAGGTGCCTCTATCTGCACGTTTACAGGTTGGAACACCAAAGTTTGTATTTGAGGCTATAACCATTCAAAAAATGGAACTTCTGGTATTAAGCACATTGGGTTGGAAAATGCAAGCTTTAACTCCATGTTCCTTCATAGATTACTTCATTAGTAAGATCAATTGTGAGCAGCATCAAATGAAATCATCCCTTTTGAAATCTGTTGAACTCATGCTAAGCATAACTAAATGTATTGATTTCTTGGAGTTCAAGGCTTCTGAGATTGCTGCAGCAGTGGCAATTTCTGTTACAAGGGAATTGGAAGCTAAAGAGATTCATAAGGCCTTATCTTCTTTGGTCATGGTAAAGGAGGAGAGAGTTTTGAAGTGTCTTGAAGTGATGAGAGATTTGTCTATGATCAAAATTTGTGGTAACTTAACTCCATTTGCATGCACAAGCTCTAATGGAGCCTCTGAGTCATGA 861 0.3693 MEEGTHVTLTLLFFEHKKICFGDYESNGLFDHNIELSDEIVGLMVQKEEEHLPRDDYFENLHAGHFNLSVRKQALDWMMKAHAYFGFGPWSIFLSVNYLDRFLSLFELPRDKNWISQLVAVSCLSIAAKIRETKVPLSARLQVGTPKFVFEAITIQKMELLVLSTLGWKMQALTPCSFIDYFISKINCEQHQMKSSLLKSVELMLSITKCIDFLEFKASEIAAAVAISVTRELEAKEIHKALSSLVMVKEERVLKCLEVMRDLSMIKICGNLTPFACTSSNGASES* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0037 286 PANTHER CYCLINS 26 282 IPR039361 -
Lan18g0037 286 PANTHER CYCLIN D2.1 PROTEIN 26 282 - -
Lan18g0037 286 SUPERFAMILY Cyclin-like 33 170 IPR036915 -
Lan18g0037 286 Gene3D - 44 258 - -
Lan18g0037 286 Pfam Cyclin, N-terminal domain 40 170 IPR006671 -
Lan18g0037 286 Gene3D - 54 171 - -
Lan18g0037 286 CDD CYCLIN 71 163 IPR013763 -
Lan18g0037 286 Pfam Cyclin, C-terminal domain 174 264 IPR004367 -
Lan18g0037 286 ProSitePatterns Cyclins signature. 71 102 IPR006671 -
Lan18g0037 286 SMART cyclin_7 76 164 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0037 Lan-Chr18 269483 271987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0037 37 234 Core Cell Cycle Gene Families AT5G65420 53.000 4.51e-71 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0037 K18810 - gmx:100794010 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0725 18 12583063 12585732 Lan18g0037 18 269483 271987 PCT
Lan6g0553 6 4821285 4823954 Lan18g0037 18 269483 271987 PCT
Lan18g0037 18 269483 271987 Lan18g0725 18 12583063 12585732 PCT
Lan18g0037 18 269483 271987 Lan6g0553 6 4821285 4823954 PCT