Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0016 ATGTCTGTCTCTGCTGCACTTTCCTCCACTACTTGTTCTCTCACATTTCCCTTCACTTCCACAAATAACATTATCAACCCAATCACACAATTCCACTCATTTTCTACTAGGCCTCATAGAGTTTTAGTAAAATCAAAGGCTACTACACCTTCTTCTGAGTCTGTTATTGTGACAAATATACCTTCTGATATGAAAGCATGGGTGTATGGTGAATATGGAAGTGTTGATGTGTTGAAGTTTCAGTCCAATGTTTCTGTCCCTCATGTTAATGAGGATCAGGTTCTTGTTAAAGTTGTTGCTGCTGCTCTTAATCCTGTTGATTTCAAGAGAAGGCAGGGCAAGTTCAGTGCCACTGATTCTACACTTCCGACTGTTCCGGGCTACGATGTCGCTGGTGTGGTGGTGAAGGTTGGTAGTAAAGTAAAGGACTTCAAAGTAGGAGATGAAGTATATGGTGATATAAATGAGAAAGCACTTGAAGGGCCAAAGCAGTTTGGGTCTCTAGCTGAGTACACAGCTGTTGAGGAGAAATTATTGGCACCAAAACCTCAAAACTTGGATTTTGCTGAAGCTGCTTCTCTTCCTCTTGCAATTGAGACTGCTTATGAGGGTTTGGAGAAGACTGGATTTTCACCTGGTAAATCTATTCTTGTTCTAAATGGTTCTGGTGGAGTTGGGAGTCTAGTCATTCAGCTAGCTAAGCAAGTTTTTGGAGCTTCAAGAGTTGCTGCCACTTCAAGCACTAGAAATTTGGAGCTATTGAAAAGCTTGGGAGCTGATTTGGCTATTGACTACACAAAGGAGAATTTTGAAGACTTGCCAGAAAAATTTGATGTAGTTTATGATGCCATTGGGCAATGTGAAAAGGCAGTGAAGGCAATAAAAGAAGGTGGCATTGTGGTAGCACTTACAGGTGCTGTTACACCACCAGGCTTCAGATTTGTAGTTACTTCAGATGGAGCTGTTCTAAGGAAACTAAATCCATATTTAGAAAGTGGGAAAGTGAAGCCAATATTAGACCCCAAAGGTCCATTCACATTTCCACAACTTGTTGAAGCCTTCTCTTATATTGAAACAAATAGAGCTATAGGAAAGGTTGTTATACATCCAATCCCATGA 1119 0.4075 MSVSAALSSTTCSLTFPFTSTNNIINPITQFHSFSTRPHRVLVKSKATTPSSESVIVTNIPSDMKAWVYGEYGSVDVLKFQSNVSVPHVNEDQVLVKVVAAALNPVDFKRRQGKFSATDSTLPTVPGYDVAGVVVKVGSKVKDFKVGDEVYGDINEKALEGPKQFGSLAEYTAVEEKLLAPKPQNLDFAEAASLPLAIETAYEGLEKTGFSPGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCEKAVKAIKEGGIVVALTGAVTPPGFRFVVTSDGAVLRKLNPYLESGKVKPILDPKGPFTFPQLVEAFSYIETNRAIGKVVIHPIP* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0016 372 Pfam Alcohol dehydrogenase GroES-like domain 92 154 IPR013154 -
Lan18g0016 372 Gene3D - 71 368 - -
Lan18g0016 372 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 213 234 IPR002364 GO:0008270|GO:0016491
Lan18g0016 372 Pfam Zinc-binding dehydrogenase 257 368 - -
Lan18g0016 372 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 34 372 IPR044626 GO:0016628
Lan18g0016 372 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 34 372 - -
Lan18g0016 372 Gene3D - 205 319 - -
Lan18g0016 372 CDD MDR_like_2 64 368 - -
Lan18g0016 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 186 308 IPR036291 -
Lan18g0016 372 SUPERFAMILY GroES-like 62 218 IPR011032 -
Lan18g0016 372 SMART PKS_ER_names_mod 73 368 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0016 Lan-Chr18 138409 140594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0016 91 260 Monolignol Biosynthesis Gene Families AT4G37980 28.426 5.32e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0016 K18980 - gmx:100780585 552.362