Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0013 ATGGCTTCTTCACTCAGAATTTCAAGACTTCTATCTCGTTCTTCTTCTTCTTCTTCTTTCTTTTCTCTAGGTGGAAATGGTAAACTGGGTAGAAGGGTGAGTAAATACAGCACTTCTGCTGCTGCTACCATTGAAGAACCAATTAAACCTTCAGTTGAAGTACAACACACCCAACTCTTAATCAATGGAAAATTCATTGACGCTGCTTCTGGTAAGACATTTCCAACATTGGATCCAAGAACAGGAGAAGTTATTGCTCAAGTTTCTGAAGGTAACGGTGAAGATGTTGATAGAGCAGTTGCAGCTGCTAGAAAAGCATTTGATGAAGGACCATGGCCTAGGATGACAGCATATGAAAGACAAAAGATAATGTTGCGTGCTGCTGATTTAATTGAAAAGCATAATGATGAGATTGCAGCACTTGAGACTTGGGATAATGGGAAACCATATGAACAATCTGCTAAGGTTGAAGTACCCATGTTGGTTCGCCAAATTCGATACTATGCTGGGTGGGCAGATAAGCTTCAAGGTCACACAATTCCAGCTGATGGAGCACTTCATGTGCAAACATTGCATGAACCAATTGGCGTTGTTGGTCAGATTATTCCATGGAACTTTCCTCTTCTCATGTTTGCTTGGAAGGTTGGACCAGCATTGGCATGTGGCAACACTATTGTTCTTAAAACAGCTGAGCAGACACCATTATCTGCTTTATATGTAGCAAATCTATTTCTTGAGGCTGGACTCCCTGCTGGTGTTTTAAATATCGTATCAGGCTTTGGCCCAACTGTTGGTGCTGCTCTTGCTAGTCACATGCATGTGGATAAGCTTGCTTTTACTGGTTCAACTGAAACTGGAAAAGCCGTTCTTCAATTGGCGGCAAAAAGCAATCTTAAGACTGTAACTTTGGAGCTTGGTGGAAAATCACCCTTTATTGTATGTAAAGACGCTGATGTAGATCAGGCTGTTGAGCTAGCACACTTGGCCTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTCGAACATTTGTACATGAAAGTATATATGATGAGTTTGTTGCGAAAGCAAAGGCTCGTGCTTTGAGTCGGGTTGTTGGCGATCCATTCAAGAGTGGAATTGAGCAAGGCCCTCAGATTGATTCAAAGCAATTTGATAAAATACTGGGTTATATCAAATCTGGTGTTGAAAATGGAGCTACCCTTGAAGCCGGAGGAGATAGGTTCGGCAACAAGGGTTATTATGTTCAGCCTACAGTATTCTCAAATGTTCAGGACAACATGGCGATTGCAAAGGACGAGATTTTTGGCCCAGTGCAATCCATATTAAAATACAAGGACCTTGATGAGGTAATTCATAGAGCAAACAACACAGCATACGGTCTTGCAGCTGGAGTGTTCACAAAGGACATAGACACTGCCAATACATTAACAAGAGCATTGAAAGCTGGATCGGTATGGGTAAACTGCTTTGATATATTTGATGCTGCAATTCCTTTTGGTGGATACAAAATGAGTGGCCAAGGAAGAGAAAAGGGAGAGTACAGTCTTAAGAACTACTATCAAGTCAAGGCTGTTGTTACTCCTTTGAAGAATCCAGCATGGCTATGA 1614 0.4164 MASSLRISRLLSRSSSSSSFFSLGGNGKLGRRVSKYSTSAAATIEEPIKPSVEVQHTQLLINGKFIDAASGKTFPTLDPRTGEVIAQVSEGNGEDVDRAVAAARKAFDEGPWPRMTAYERQKIMLRAADLIEKHNDEIAALETWDNGKPYEQSAKVEVPMLVRQIRYYAGWADKLQGHTIPADGALHVQTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVANLFLEAGLPAGVLNIVSGFGPTVGAALASHMHVDKLAFTGSTETGKAVLQLAAKSNLKTVTLELGGKSPFIVCKDADVDQAVELAHLALFFNQGQCCCAGSRTFVHESIYDEFVAKAKARALSRVVGDPFKSGIEQGPQIDSKQFDKILGYIKSGVENGATLEAGGDRFGNKGYYVQPTVFSNVQDNMAIAKDEIFGPVQSILKYKDLDEVIHRANNTAYGLAAGVFTKDIDTANTLTRALKAGSVWVNCFDIFDAAIPFGGYKMSGQGREKGEYSLKNYYQVKAVVTPLKNPAWL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0013 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 71 527 IPR016162 GO:0016491
Lan18g0013 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 309 498 IPR016163 GO:0016620
Lan18g0013 537 Pfam Aldehyde dehydrogenase family 66 527 IPR015590 GO:0016491
Lan18g0013 537 CDD ALDH_F2BC 54 529 - -
Lan18g0013 537 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 303 310 IPR029510 GO:0016491
Lan18g0013 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 331 342 IPR016160 GO:0016491
Lan18g0013 537 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 22 537 - -
Lan18g0013 537 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 22 537 - -
Lan18g0013 537 SUPERFAMILY ALDH-like 52 531 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0013 Lan-Chr18 119629 125027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0013 6 537 Aldehyde Dehydrogenase Gene Family AT3G48000 74.953 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0013 K00128 - gmx:100811891 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0013 18 119629 125027 Lan17g1086 17 17734677 17739315 PCT
Lan17g1086 17 17734677 17739315 Lan18g0013 18 119629 125027 PCT