Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0008 ATGACAACAAAGAGTGATGATGAGGTGAAGCTAATAGGAGCATGGCCTAGTCCATTTGTGTTGAGGGCTAGGGTTGCTCTTAATCTCAAGTCAGTGAAGTATGAGTTCCTTCAAGAGAATTTTGCACCCAAAAGCCAACTTCTTATTCAATCCAATCCTGTGTATAAGAAAATCCCAGTTCTTATTCATGGTGACAAACCCATTTGTGAGTCTTTGATTATTGTGGAGTATATTGATGAAGCTTGGTCCTCTGGCCCTTCCATTCTCCCTTCTCATCCTTATGATCGTGCCATTGCTCGCTTCTGGTCTTCCTATATTGATGACAAGTGGTTCCCGGCCATGAAATCCATTGCAGGAGCAGCAGGAGATGATGAGAAGAAGAAGCTGATAGAAGAGGTGGGAGAAGGATTGGCATTGCTAGAAGATGCATTAAAGAAGATAAGCAAAGGCAAGGACTATTTTGGTGGTGACCAAATTGGTTACTTGGACATTGCATTTGGTGGGTTCTTGGGTTGGCTGAGGGTCACAGAGGCATCCATTGGGGTCAAGTTGCTGAATGAGGCTACCACACCTGGGTTGCTTAATTGGGCTCACAAGTTTGCAGCACATCATGCTGTCAAAGATGTTCTCCCAGAAACTGGGAAGCTTCTTGAGTTTGCTAAGGTTTTGATGGCCAGAAATGCTAATGCTGCAAAGTAA 699 0.4406 MTTKSDDEVKLIGAWPSPFVLRARVALNLKSVKYEFLQENFAPKSQLLIQSNPVYKKIPVLIHGDKPICESLIIVEYIDEAWSSGPSILPSHPYDRAIARFWSSYIDDKWFPAMKSIAGAAGDDEKKKLIEEVGEGLALLEDALKKISKGKDYFGGDQIGYLDIAFGGFLGWLRVTEASIGVKLLNEATTPGLLNWAHKFAAHHAVKDVLPETGKLLEFAKVLMARNANAAK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0008 232 Pfam Glutathione S-transferase, N-terminal domain 9 80 IPR004045 -
Lan18g0008 232 CDD GST_C_Tau 93 223 IPR045074 GO:0004364|GO:0006749
Lan18g0008 232 SFLD Glutathione Transferase (cytosolic) 6 229 IPR040079 -
Lan18g0008 232 CDD GST_N_Tau 9 82 - -
Lan18g0008 232 Pfam Glutathione S-transferase, C-terminal domain 101 202 IPR004046 -
Lan18g0008 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Lan18g0008 232 Gene3D - 89 232 - -
Lan18g0008 232 Gene3D Glutaredoxin 2 88 - -
Lan18g0008 232 PANTHER GLUTATHIONE S-TRANSFERASE U17 7 221 - -
Lan18g0008 232 SUPERFAMILY Thioredoxin-like 9 111 IPR036249 -
Lan18g0008 232 SFLD Main.3: Omega- and Tau-like 6 229 IPR045073 -
Lan18g0008 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 223 IPR010987 -
Lan18g0008 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 221 IPR045073 -
Lan18g0008 232 SUPERFAMILY GST C-terminal domain-like 80 225 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0008 Lan-Chr18 73854 75441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0008 5 226 Glutathione S-transferase Gene Family AT1G10370 61.883 5.32e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0008 K00799 - aip:107635803 355.525