Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1302 ATGGTTGAAGAGTTTTCTACAAAAGTTTCTGTTGTTGTAAGAGAGTTTAACCCAAATAAAGATAGAGAGAAAGTTGAAGGTGTTGAAAGAATATGTGAAGTTGGACCAAGTGGTAAAATTTCTCTATTCACTGATCTTCATGGTGACCCTATTTGCAGAGTTAGAAACTCACCCACTTTCAACATGCTGGTAGCAGAGATTGATGAAGAGATTGTAGGAATGATAAGAGGTTGCATCAAAACCGTTACTTGTGGCAAAAAACAACTTCACAGAAAAAACAACAACGATTCTGAGCCAACCAAACATGTCCCTATTTACACCAAAGTTGCATATATACTAGGCCTTCGTGTTTCTCCATCTCATAGGAGAATGAGAATTGGGTTGAAGTTGGTTCAAACAATGGAACAATGGTTTAGTGACAATGGTGCTGAATATTGTTACATAGCAACTGAAAACGACAACGTTGCATCGGTTAACCTTTTCACACAAAAATGTGGTTACTCAAAGTTCAGAACTCCTTCAATTCTTGTGAACCCAGTTTTTGCTCATAAAGCAAAAACCTTAACAAACAAATTCACTATAATCAAACTCAACCAAAACGACGCCGAATCACTCTACCGTAACCGTTTCTCAACTACCGAGTTTTTCCCTCGTGACATTGACTCTGTTTTGAAAAACAACCTTAGTCTTGGTACCTTTGTTGCGGTTCCTCGTGGTTCATACGATTGTAACTCGTGGCCTGGTACGAACCGGTTTTTATTAAACCCACCAGAGTCTTGGGCTGTGGTTAGTGTTTGGAATTGTAAAAATGTGTTTACACTTGAGGTTCGTGGTGTGTCTCGTGTTAAGAGAATGTTGGCTAAGATGACACGAGTTTTAGACCGGACTATGCCTTGGTTTCGGTTACCTTCGGTTCCAAATTTTTTTAGACAGTTTGGTTTGCATTTTATGTATGGGCTTGGTGGTGATGGACCGGATTCGATTCAAATGGTTCGGGCTTTGTGTGGGTTCACGCATAATTTGGCTAAGGAAAATGGTTGTAGTGTGGTTGCGACCGAAGTTTCGAGCCTTGAACCGCTTCGGTTAGGAGTCCCACATTGGAAGATGTTGTCTTGTGAGGAAGATTTGTGGTGTATTAAGAGGCTTGGTGAAGATTATAGTGATGGTTCGGTTGGTGATTGGACTAAATCTCCACCTAGTTTATCTATTTTTGTTGACCCAAGAGAGTTCTAA 1233 0.4015 MVEEFSTKVSVVVREFNPNKDREKVEGVERICEVGPSGKISLFTDLHGDPICRVRNSPTFNMLVAEIDEEIVGMIRGCIKTVTCGKKQLHRKNNNDSEPTKHVPIYTKVAYILGLRVSPSHRRMRIGLKLVQTMEQWFSDNGAEYCYIATENDNVASVNLFTQKCGYSKFRTPSILVNPVFAHKAKTLTNKFTIIKLNQNDAESLYRNRFSTTEFFPRDIDSVLKNNLSLGTFVAVPRGSYDCNSWPGTNRFLLNPPESWAVVSVWNCKNVFTLEVRGVSRVKRMLAKMTRVLDRTMPWFRLPSVPNFFRQFGLHFMYGLGGDGPDSIQMVRALCGFTHNLAKENGCSVVATEVSSLEPLRLGVPHWKMLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPSLSIFVDPREF* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1302 410 CDD NAT_SF 62 148 - -
Lan17g1302 410 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 189 IPR000182 GO:0016407
Lan17g1302 410 Gene3D - 49 173 - -
Lan17g1302 410 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 6 410 - -
Lan17g1302 410 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 51 170 IPR016181 -
Lan17g1302 410 PANTHER N-ACETYLTRANSFERASE 6 410 - -
Lan17g1302 410 Pfam Acetyltransferase (GNAT) family 61 167 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1302 Lan-Chr17 21291718 21293692 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lan17g1302 Acetyltransf_1 7.7e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1302 - - gmx:100804109 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1302 17 21291718 21293692 Lan6g0262 6 1959586 1961767 LSH
Lan17g1302 17 21291718 21293692 Lan17g1302 17 21291718 21293692 PCT
Lan6g0262 6 1959586 1961767 Lan17g1302 17 21291718 21293692 PCT
Lan17g1302 17 21291718 21293692 Lan6g0262 6 1959586 1961767 PCT