Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1294 ATGGCAACTCTTATCTGCAACACAATTCAACACTTTCTATTCACACTTCTTTTCCTTATCCAATTATCATTACTACAATTCATCTCACTCAGTTACACTATTCCAAACAACTACTTCATAAATTGTGGCTCAAATAACAATGTTACAGAACCAGAAAGTGACCATGTTTTTGTTGGAGAATCATATTCTCAAGCTAGTTTTAGCAGCAAAAGCAAAATATATACTAACCAATCATTAGTCCTTTCTTCTCTTTACCAAACAGCAAGAATTTTCACTCAAAATCATTCTTGGTATGGCTTCAATATAGACACAACAGGCACTTACATGATTCGGCTTCATTTCTTCGCGTTTGCTTCTTCGACAAGCAATCTTTCCTCAGCTAAGTTCAATGTTTCAGTACCTAATTTCTGGCTGCTACGAAATTTCGATGCTCGAAATTATACTAACATGCCTTTAGTAAAAGAGTTTTTATTGCATGTCCCTAATGGAACCTTTAAAATCACTTTCACACCTTTGTTACAATCATTTGCCTTTGTGAATGCTATAGAATTCTTCATGCTGCCCCTCTATTTGGTCCCGGATAAGGTTGCGATTTTTGGTTATGGTACTAATCGCGGCTTAACTAGTTACCCTAGGAGTATGCAGGCACAATTGTTGGAGACTATATACAGGATTAATGTTGGTGGTGAAAATGTGACAAGGGGTATTGATAATTTATGGAGAAACTGGTTTTCTGATGATGCTTATGTTTTAAATCCCGAAAATGCGAAGAATAGTACCCCGTATAATAGTTTAATCAAATACCATGTTGGTGATGATTCTGAGGGTCCAAATTCTAATAAGTTTACTGCACCAAATGTTGTGTACCAAACTGCTAAGCAAATTATAAGCAATAGCTCTAATTTGAACATAACTTGGAGTTTTGCGGTCGATAAGGATACCGATCATTTTCTTCGGCTTCATTTCTGTGACATTTGGAATTCAGAGTTTGGTCTTGCATATTTCAATCTATACATTTATGACAACTTTGTTATGCAGATAAATAATAATAGTGATGGAAATCTGATTGAACCATTGCCTTCTCCTTATTATTATGATTATGTTGTTCACTCTGATGATTCTGGTGTAATGAAGATTAGTGTAGGGCCTGATAAAACCGAAAACCGAATAAGTGCTTTTTTGAATGGACTAGAAATAATGAAGTTGAGTAATTCATCAGATTCTGTACCCTTGGAGGTTGAATCTAAGCATAAGTATAAGCATCTTGCTGTGGTGATAGGTGCAGTTCTTGGTGGTTTAGTTCTGGTTGGTGTTGTGGTAGTGGGATTTGTATGGCGTCTTAAAACGAGGAAACAAAAGGCGGCTGAGAATTCGGATTGGTTACCGATTCATGTCACTGCAGTAGGGAGTTCTCATAGTAGATTGACTGAAGGAACCATCCAAGGCTCCCCTCTTCCCAACATTAATCTTGGACTGAAGATTTCATTGATCGATATTCAATCCGCTACGAGTAACTTCGATGCCAACGAGATAATTGGCAAGGGAGGGTTCGGCAGTGTATATAAGGGAGTTCTTAAGAATGGGCTGAAAGTGGCTGTGAAAAGAAGTGAGTCAGGGTCAGGTCAAGGCCTTCCTGAGTTTCAGACCGAGATCATGGTTTTGTCGAAGATTCGTCATAGGCACCTTGTTTCGTTGATCGGTTATTGCGATGAAAGGAACGAGATGATACTGGTTTATGAGTACATGGAAAAAGGGACAGTTAGAGATCATTTGTACAACACGAATTCACCAACCTTGTCTTGGATGCAAAGGCTTGAAATTTGCATTGGAGCTGCAAGAGGCCTACATTACCTTCACAAAGGAGCATCAGGGGGAATCATTCACCGCGATGTGAAGTCGTCTAACATATTGCTTGATGAGAATTATGTTGCTAAAGTTGCTGATTTCGGCCTTTCGAAAACAGGCCCTCTAGATGAAAATCAATCATATATTAGCACAGGTGTTAAAGGTACTTTCGGCTATCTTGATCCCGAGTATTTCAGGTCAGAACAGCTTACAGAAAAATCTGATGTCTATTCATTTGGTGTGGTTCTTGTAGAAGTGTTATGTGCAAGATCAGCTATTGATCCTTTGCTTCCAAGGGACCAAGCGAACTTGGCCGAATGGGGAATCCTTTGCAAAAACAAGGGGATACTAGAAGATATCATCGACCCTTCAATCAAGGGCCAGATAAACCCAAACTCGCTATGTAAATTCAGCGAAACATTCGAAAAATGCTTGCAAGAAGATGGTTGTGATAGGCCAACCATGAGGGATGTGCTGTGGGACTTAGAGTATGCGTTGCAGCTTCAGCGCGGCGCAGTACAGCGAGAGCCTCATGAGGATAGTTCTAGTAGCACTTCGGCATCACTCCAATTGCATAATTTGAGACTTCTTCCTTCGCTTTCGTCACTAAGTGAAGTGGAAGACATGTCTATTGTGAAGGGTGATGAATCTGATAGTGCAGCAGGTTCTGTTTGA 2520 0.396 MATLICNTIQHFLFTLLFLIQLSLLQFISLSYTIPNNYFINCGSNNNVTEPESDHVFVGESYSQASFSSKSKIYTNQSLVLSSLYQTARIFTQNHSWYGFNIDTTGTYMIRLHFFAFASSTSNLSSAKFNVSVPNFWLLRNFDARNYTNMPLVKEFLLHVPNGTFKITFTPLLQSFAFVNAIEFFMLPLYLVPDKVAIFGYGTNRGLTSYPRSMQAQLLETIYRINVGGENVTRGIDNLWRNWFSDDAYVLNPENAKNSTPYNSLIKYHVGDDSEGPNSNKFTAPNVVYQTAKQIISNSSNLNITWSFAVDKDTDHFLRLHFCDIWNSEFGLAYFNLYIYDNFVMQINNNSDGNLIEPLPSPYYYDYVVHSDDSGVMKISVGPDKTENRISAFLNGLEIMKLSNSSDSVPLEVESKHKYKHLAVVIGAVLGGLVLVGVVVVGFVWRLKTRKQKAAENSDWLPIHVTAVGSSHSRLTEGTIQGSPLPNINLGLKISLIDIQSATSNFDANEIIGKGGFGSVYKGVLKNGLKVAVKRSESGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERNEMILVYEYMEKGTVRDHLYNTNSPTLSWMQRLEICIGAARGLHYLHKGASGGIIHRDVKSSNILLDENYVAKVADFGLSKTGPLDENQSYISTGVKGTFGYLDPEYFRSEQLTEKSDVYSFGVVLVEVLCARSAIDPLLPRDQANLAEWGILCKNKGILEDIIDPSIKGQINPNSLCKFSETFEKCLQEDGCDRPTMRDVLWDLEYALQLQRGAVQREPHEDSSSSTSASLQLHNLRLLPSLSSLSEVEDMSIVKGDESDSAAGSV* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1294 839 Gene3D Phosphorylase Kinase; domain 1 473 581 - -
Lan17g1294 839 ProSiteProfiles Protein kinase domain profile. 506 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1294 839 PIRSF SRK 46 137 IPR024171 GO:0004674
Lan17g1294 839 PIRSF SRK 375 823 IPR024171 GO:0004674
Lan17g1294 839 SUPERFAMILY Protein kinase-like (PK-like) 491 778 IPR011009 -
Lan17g1294 839 SMART serkin_6 506 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1294 839 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Lan17g1294 839 PANTHER OS07G0166700 PROTEIN 26 828 IPR045272 GO:0004714|GO:0006468
Lan17g1294 839 CDD STKc_IRAK 512 778 - -
Lan17g1294 839 Pfam Protein tyrosine and serine/threonine kinase 509 774 IPR001245 GO:0004672|GO:0006468
Lan17g1294 839 Pfam Malectin-like domain 40 401 IPR024788 -
Lan17g1294 839 Gene3D Transferase(Phosphotransferase) domain 1 582 802 - -
Lan17g1294 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Lan17g1294 839 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 26 828 - -
Lan17g1294 839 Gene3D - 36 186 - -
Lan17g1294 839 Gene3D - 218 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1294 Lan-Chr17 21189392 21192232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1294 12 814 Receptor kinase-like Gene Family AT2G23200 44.782 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan17g1294 Malectin_like 1.1e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1294 - - adu:107480521 982.245