Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1287 ATGCAACCACTCTTCCCACTCCTCTTTCTATTCCTAACTCTCTCTTCTTCTTTTTCTTTTTCTTCTTCTTCTACCACTGAATCAACACTACCATCCGACGCCGTTTCACTCCTCTCTTTCAAATCAAAAGCAGACTTAAATAACAAACTCCTCTATTCCCTAAATGAACCCTATGATTATTGTAATTGGCGAGGTGTCAAATGTTCACAAAACAATGTTATTTCCTTTATTCTCCAAAATATTAAACTCAATGGAACCTTTTCTCCCAACTCATTAACTCGTTTAACTCACCTCCGAGTCTTAATTCTCCGAAACAACTCGTTATTCGGATCCATTCCTGACTTATCATCACTTAACAAACTTAAAATACTTTTACTTGATCATAATCATTTCTCCGGTTCGATACCGGTTCAATTGAACCTTCTAGACCGGGTTGTTTCAATTCGGCTTGATTCTAATTCGTTAAGTGGAACTGTTCCGGTTATTGAGATTCGTGGTTTGAAAATATTCAATGTTTCGGAGAATAAACTTACCGGTCCGGTTCCGTTTACGGCAACACTTTCGAGATTTGATGCGACGTCGTTTTCAGGGAACCCTGGTCTTTGTGGTGAGATTGTGCATAGGACTTGTGATTCTCATTCTAGATTCTTCAATGGTGATGGTGATGGTTGGAATGGTTCTGGTTCTGGTTCTTCTTCTTCCTCTGTCGCGCCGCTCGGAGAAAGTCAACAGTCGCAGGGAATCGTGGTGGTGAATTCTGCTCCGGCGAAGAAGAAGCGTGGAACGAAAAGGAATGGTTTAGTTCTCGGGTGCAGTGTAGTGATTGTAATTCTTATTGCATCTGTAATTGTTGCTGTGGTGTTGGTTAACAAGAAGAAACATAGCTTTTCGAGAAAAGAACAGCGAGAAAAAGCGGTTGCTGCGGTGGTGGAAGAAGGGGTTTCGGAAACGGTGGATGGAAACGACGTCGTTGAGGTTGAAGCGGTTACGAAGATGAGGAGCGGGAGGTTAGTGTTCTGCTGCGGTGAGGTGCAGGAGTATACACTAGAGCAGTTGATGAGAGCTTCGGCGGAGGTGTTGGGAAGGGGAAGCCTAGGGACGACGTATAAGGCGGTGGTGGAGTCCAAGTTGATATTGACGGTGAAGAGATTTGACGGTGGCAAGACGGCGGCGACGAGTGGTGAAGATTTTGAGAAACGGATGGAGATGGTAGGTAGGTTGAGGCATCCTAATTTGGTTCCTGTTAGAGCTTATTTTCAAGCTAAGGGAGAAAAGCTTGTGATCTTTGATTATCAACCTAATGGAAGCCTCTTCAACCTTGTTCATGGTTCAAGATCTGCTAGGGCAAAACCCCTCCATTGGACATCATGCTTAAAAATAGCTGAAGATGTAGCTCATGGACTTGCTTATATCCATCAAGCTTCTTCATTAATTCATGGCAATCTCAAATCCTCTAATGTCCTTCTCGGAGTAGATTTCGAAGCTTGTATCACGGACTATGGATTGTCCCTCTTTGCGGACCCTTCATTGACCGAAGAGGATCCTAGTTCCACGGCTTATAAAGCGCCGGAAACTCGCAAGTCTAGCGGCAGGGCCTCTGCGAAGTCTGATGTGTATTCCTTCGGCGTGCTTGTATTGGAGCTTTTGACGGGTAAACATCCTTCGAAACACCCTTTCCTCATGCCGACGGATTTGCAAGATTGGGTTAGGGCAATGAGGGATGATGATGGTAGTGAAGACAAGTGGTTAGAAATGCTCACAGAGGTCGCTAGTATTTGCAGCGCGACCTCGCCGGAGCAAAGGCCGACAATGTGGCAAGTCCTGAAGATGATACAGGGAATAAAGGAGAGTGTAGCAATGGAGGACAATACACAAAACAGACTCTAA 1887 0.4462 MQPLFPLLFLFLTLSSSFSFSSSSTTESTLPSDAVSLLSFKSKADLNNKLLYSLNEPYDYCNWRGVKCSQNNVISFILQNIKLNGTFSPNSLTRLTHLRVLILRNNSLFGSIPDLSSLNKLKILLLDHNHFSGSIPVQLNLLDRVVSIRLDSNSLSGTVPVIEIRGLKIFNVSENKLTGPVPFTATLSRFDATSFSGNPGLCGEIVHRTCDSHSRFFNGDGDGWNGSGSGSSSSSVAPLGESQQSQGIVVVNSAPAKKKRGTKRNGLVLGCSVVIVILIASVIVAVVLVNKKKHSFSRKEQREKAVAAVVEEGVSETVDGNDVVEVEAVTKMRSGRLVFCCGEVQEYTLEQLMRASAEVLGRGSLGTTYKAVVESKLILTVKRFDGGKTAATSGEDFEKRMEMVGRLRHPNLVPVRAYFQAKGEKLVIFDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQASSLIHGNLKSSNVLLGVDFEACITDYGLSLFADPSLTEEDPSSTAYKAPETRKSSGRASAKSDVYSFGVLVLELLTGKHPSKHPFLMPTDLQDWVRAMRDDDGSEDKWLEMLTEVASICSATSPEQRPTMWQVLKMIQGIKESVAMEDNTQNRL* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1287 628 SUPERFAMILY L domain-like 29 203 - -
Lan17g1287 628 MobiDBLite consensus disorder prediction 224 241 - -
Lan17g1287 628 ProSiteProfiles Leucine-rich repeat profile. 97 119 IPR001611 GO:0005515
Lan17g1287 628 PANTHER LRR RECEPTOR-LIKE KINASE 126 625 - -
Lan17g1287 628 PANTHER LRR RECEPTOR-LIKE KINASE 2 136 - -
Lan17g1287 628 MobiDBLite consensus disorder prediction 221 241 - -
Lan17g1287 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 126 625 - -
Lan17g1287 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 136 - -
Lan17g1287 628 Pfam Protein kinase domain 357 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1287 628 Gene3D Phosphorylase Kinase; domain 1 322 431 - -
Lan17g1287 628 ProSiteProfiles Protein kinase domain profile. 354 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1287 628 SUPERFAMILY Protein kinase-like (PK-like) 358 615 IPR011009 -
Lan17g1287 628 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Lan17g1287 628 Gene3D Transferase(Phosphotransferase) domain 1 433 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1287 Lan-Chr17 21114161 21118605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1287 16 628 Receptor kinase-like Gene Family AT3G50230 50.076 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan17g1287 Pkinase 1.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1287 - - lang:109331866 1117.83