Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1286 ATGGCGTCGCCAGCTTCTACTGATGGATCGCAGCCTCCTCCCGAGGACTACTTGGTGAAGATAGCGCCGACCACAACTCCTACACTTAAACGTGTATTATTGGTTATCGATTCTTTAAAGAATCAAGTTGTCGCTGATCGATTGATTTCCATAGAGAAAAGAGTGGAAGAAAATCGACAGAAGCTGGCTGGTCTCACAGACAATCTTCGTAAAATAGCAAAGGAAAGAAGCACATGTAGCTTTACTAGAACAGGAAGAAGTCTAGATCTACTAGCAAAGAGGCAAAAAGATGCCATTGATGCGAACAATGGAGGTAGGGAGAACACTGGTGATCATGAAGATAACCTTCGTTGTATAGCAGTTCTTCATAAATATAATGCTCCTGCTCCTGACCCAAGTCTTGTTGTGACTATTATGTTACCTGGAATTATGAAGATACCTAAGTACTCTACATGGCTTTTTCTAGACAGAAATGAATTAACGACGAAGGAACAGTCAGTGGAAGGCCGAAGGCAAATTTATTATGATGAGAATGGTGGAGAAACACTTATTTGCAGTGATAGTGAGGAGGAAATGCCAGTGGAAGAACCGGAAAAAAAAGACTTCCTTAAATCAGAAGATTTTATACTCTGCATGACTATCAAAGAACTTGGTTTATGTGATCTTGTTGTGGATTCACTGAGTCGGTTGTTTTCTAGAGACGCGAGCGAAATCAAGGAAAGATATGAAACTCTTATTAATAAAGAGAATACTGCTAGTGGTTCCAATACTAGAGATACCGAAGAGCATTTTCAAATTGGAAATTTATGTATTGAAAAGGATCTTGGAGCAGCTCAAGCCTCTTTTGACAACCTATTTTGCCGACGATGTCTTGCTTTCGCTTGCAGATTACATGGATGTTCACAAGATCTTATATTCCCTGCTGAGAAACAAACTCCCTGGATTCCTCCCGATGCCGGAAATGCACCATGTGGATCAAATTGTTTTCTACTGGTACTTCAGTCAGAAAATTTTGCCAAAGTGACCTCTTCTTCCCAAGCTGATGTTGAAGAGAATCGCTCTCGTGATGTGGAGGTGCAAATGTTATCTAAGGAGTCTAGTGATATATCTGCTAGAAAACAGATAGAATGTAGCAAAACTGAAGGTGCTTCATCTAATGCAAAGAACATATATGAGAGTAGTGGCTCAGAAAATGCTCGTGTACAGGAAACCATTTCACCTTCCAAATCTGTGAATGAAGGTGGGATTATTAAGACAGATAGTAAGCGTTTGGCAGAAAGTGTTCTTGTTTCCATGCAGAAGCGGCAAAAGCAAGCAGCAACGCCAGATTCTAATGACATTGGTGAACGACTTGGTTCTTCATCAAACAAGATGAATACAAACTCTCTCATCATTAGCAGTGAGGACAACATGATGAAAGAACAGTTTGTACGTGAGAGCGATTGCCAACAGGAATTCACTGACAATGAGTCTTGGAAACCTCTTGAAAAAGGGCTTCTAGACCAAGGAATGGAGATGTTTGGGAGAAACAGCTGCTTAATAGCTAGGAACCTCTTATCTGGTCTAAAGACATGCTGGGAGATTTACCAATACATAAATTGCAATGACAGAAAGAAGGAAGGTGCTATTGGTGATGCTCCAAATTCTCCTCTGGAAGGCGATTTAAAGGGTAATAATAAAGAGAAGCGGGGATCAAGATTTCAACGTAGAAGAGGAAAAGTCGGTCGCTTAAGGTATACCTGGAAATCTGCTGCTCATCGTTCAAATAGGAAAAGGATTACAGGGGGAACAGGTAAGCTCTACAAGCATTATAGTCCATGCGATTGCCAAACAGCTTGTGGAAAGGAGTGCTCTTGTTGTGAAATTGGAACCTACTGTGAGAAGTACTGTGGATGTCCAAAGAGTTGCAAGAATCGATTCCGTGGATGTCGTTGTGCTAAGAATCAGTGCCAAACTCGACAATGCCCATGCTTTGCTGCAGATAGGGAATGTGATCCAGATATTTGTAGGAATTGTTGGGTCAGTTGTGGTGATGGTACTTTTGGGTCTCCTGTCCAAAGAGGCGATAATTACGAATGCCGTAATATGAAGTTTCTTCTCAGACAGCAGCGACGGATTCTTCTTGGAGAGTCTGATATACATGGCTGGGGAGCGTTCTTAAAGGAAACTGTTGAGAAGAACGAATACCTCGGAGAGTATACTGGAGAGTTAATTTCACATCGCGAAGCGGAAAAGAGAGGAAAGATATATGACCTTAAAAATTCAAGTTTTCTCTTTAATTTGGATGAACAGTATGTTCTCGATGCTCAACGGATGGGTAACAAATTGAAGTTCGCTAATCATGCTACTCATCCAAACTGCCATGCAAAGGTTGTTATGGTTGCTGGAGACTATCGGGTAGGCATTTTTGCAACGGAGCGGATTCGTGCTGGGGAGGAAATATTCTATAATTATGGATTTGCACCAGAGTGCACTCCAGAGTGGGTTCTAAAGCTTGAGGCATCTACACCAAAGAAAGAGCGCGGCGGCGCTTCGTCGAGTCGTCGTGCCAAGAAGTGTGCTTAA 2565 0.4187 MASPASTDGSQPPPEDYLVKIAPTTTPTLKRVLLVIDSLKNQVVADRLISIEKRVEENRQKLAGLTDNLRKIAKERSTCSFTRTGRSLDLLAKRQKDAIDANNGGRENTGDHEDNLRCIAVLHKYNAPAPDPSLVVTIMLPGIMKIPKYSTWLFLDRNELTTKEQSVEGRRQIYYDENGGETLICSDSEEEMPVEEPEKKDFLKSEDFILCMTIKELGLCDLVVDSLSRLFSRDASEIKERYETLINKENTASGSNTRDTEEHFQIGNLCIEKDLGAAQASFDNLFCRRCLAFACRLHGCSQDLIFPAEKQTPWIPPDAGNAPCGSNCFLLVLQSENFAKVTSSSQADVEENRSRDVEVQMLSKESSDISARKQIECSKTEGASSNAKNIYESSGSENARVQETISPSKSVNEGGIIKTDSKRLAESVLVSMQKRQKQAATPDSNDIGERLGSSSNKMNTNSLIISSEDNMMKEQFVRESDCQQEFTDNESWKPLEKGLLDQGMEMFGRNSCLIARNLLSGLKTCWEIYQYINCNDRKKEGAIGDAPNSPLEGDLKGNNKEKRGSRFQRRRGKVGRLRYTWKSAAHRSNRKRITGGTGKLYKHYSPCDCQTACGKECSCCEIGTYCEKYCGCPKSCKNRFRGCRCAKNQCQTRQCPCFAADRECDPDICRNCWVSCGDGTFGSPVQRGDNYECRNMKFLLRQQRRILLGESDIHGWGAFLKETVEKNEYLGEYTGELISHREAEKRGKIYDLKNSSFLFNLDEQYVLDAQRMGNKLKFANHATHPNCHAKVVMVAGDYRVGIFATERIRAGEEIFYNYGFAPECTPEWVLKLEASTPKKERGGASSSRRAKKCA* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1286 854 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 450 852 - -
Lan17g1286 854 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 18 456 - -
Lan17g1286 854 MobiDBLite consensus disorder prediction 434 460 - -
Lan17g1286 854 Coils Coil 48 75 - -
Lan17g1286 854 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 35 854 IPR025778 GO:0031519
Lan17g1286 854 MobiDBLite consensus disorder prediction 386 414 - -
Lan17g1286 854 Gene3D SET domain 604 821 IPR046341 -
Lan17g1286 854 SMART set_7 704 825 IPR001214 GO:0005515
Lan17g1286 854 ProSiteProfiles CXC domain profile. 585 689 IPR026489 -
Lan17g1286 854 ProSiteProfiles SET domain profile. 704 819 IPR001214 GO:0005515
Lan17g1286 854 Pfam SET domain 715 819 IPR001214 GO:0005515
Lan17g1286 854 SMART CXC_2 638 675 IPR033467 -
Lan17g1286 854 CDD SET_EZH 704 820 - -
Lan17g1286 854 SUPERFAMILY SET domain 605 821 IPR046341 -
Lan17g1286 854 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 450 852 IPR045318 GO:0006338|GO:0018024
Lan17g1286 854 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 18 456 IPR045318 GO:0006338|GO:0018024
Lan17g1286 854 MobiDBLite consensus disorder prediction 543 574 - -
Lan17g1286 854 Pfam CXC domain 642 673 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1286 Lan-Chr17 21098815 21107321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1286 700 822 C2H2 Transcription Factor Family AT2G23740 30.000 1.84e-10 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan17g1286 SET 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1286 - K11430 gmx:100799832 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1286 17 21098815 21107321 Lan18g1002 18 15052576 15060817 LSH
Lan17g1286 17 21098815 21107321 Lan6g1422 6 19044982 19062117 LSH