Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1285 ATGGCTGCAACAAATAATGAACAAGAACAAGAAAACCAACTCATTGGACACAAAGATCTTGCTCATAAGAGTCTCCTTCAGAGTGATGCACTCTATCAGTATATACTTGAAACAAGTGTGTTTCCAAGAGAGCATGAAAGCTTGAAAGAGCTCCGAGAGATGACAGAAAAGCACCCGAGAAATCTTATGGCTACACCACCTGATGAAGGACAACTTGTGAGTATGTTGCTTAAACTCATAAATGCGAAGAACACAATTGAAATTGGTGTCTACACTGGTTACTCTCTACTTTCCACTGCTCTAGCTCTTCCCCATGATGGAAAGGTGTTGGCTATGGATGTGAACCGTGAATATTATGAACTTGGATTACCCATAATTCAAAAAGCTGGAGTGGAACATAAGATTGATTTCAGAGAAGGACCTGCACTTCCTCTTCTTGATCAAATGCTTAAAGATGAAAAGAAGAAGGGGTCATTTGATTTTGTGTTCGTGGATGCTGACAAAAACAATTACTTAAACTACCACAAGAGGGTGATAGAGCTTGTGAAAATTGGAGGAGTGATCGGATACGACAACACTCTATGGTGTGGATCTGTTGTGGCCCCACCTAATGCACCTCTAAAGGGTTATATTAAGCAATTTCGTGGTGATATTATGGAACTCAATAACTATCTTGCTAATGATTCTAGAATTGAGATTTGTCAAATTCCTATTGGTGATGGTGTTACCCTGTGCCGCCGTATCATCTGA 750 0.4 MAATNNEQEQENQLIGHKDLAHKSLLQSDALYQYILETSVFPREHESLKELREMTEKHPRNLMATPPDEGQLVSMLLKLINAKNTIEIGVYTGYSLLSTALALPHDGKVLAMDVNREYYELGLPIIQKAGVEHKIDFREGPALPLLDQMLKDEKKKGSFDFVFVDADKNNYLNYHKRVIELVKIGGVIGYDNTLWCGSVVAPPNAPLKGYIKQFRGDIMELNNYLANDSRIEICQIPIGDGVTLCRRII* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1285 249 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 5 249 - -
Lan17g1285 249 PANTHER O-METHYLTRANSFERASE-RELATED 5 249 - -
Lan17g1285 249 Pfam O-methyltransferase 38 248 IPR002935 GO:0008171
Lan17g1285 249 CDD AdoMet_MTases 86 188 - -
Lan17g1285 249 Gene3D Vaccinia Virus protein VP39 14 249 IPR029063 -
Lan17g1285 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 247 IPR029063 -
Lan17g1285 249 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 248 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1285 Lan-Chr17 21095077 21097327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1285 5 248 Monolignol Biosynthesis Gene Families AT4G34050 70.492 1.33e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1285 K00588 - gmx:100795858 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1285 17 21095077 21097327 Lan6g1419 6 19016617 19019618 LSH
Lan6g1419 6 19016617 19019618 Lan17g1285 17 21095077 21097327 LSH
Lan17g1285 17 21095077 21097327 Lan6g1419 6 19016617 19019618 PCT
Lan17g1285 17 21095077 21097327 Lan17g1285 17 21095077 21097327 PCT
Lan6g1419 6 19016617 19019618 Lan17g1285 17 21095077 21097327 PCT