Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1247 ATGAAATCACTCTTTCAAAAACATGTTTCTCATAAATTGCATCTATTCATTATTTTGTGTTCAACCATATCCATGATCTTTGAATATGTTTGTGGTGTAAATCTACCAAATAATGAAACTGTGCCAGCAGTGATTATATTTGGAGATTCTATAGTTGATTCTGGAAACAATAACTATATTGATACACTTATCAAATGCAATTTCCCACCATATGGTAGAGATTTTGGTGAAGGAAATCATCCAACTGGAAGGTTCAGTAATGGTTTAGTCCCTTCAGACATCATTGCTGCAAAATTTGGAGTGAAGGAGATTTTACCAGCTTATCTTGATCCAGATTTGCAAATCCAAGAACTTCTAACTGGTGTAAGTTTTGCTTCTGGTGGTGCTGGATATGATCCTCTAACATCTGAATTAGTGTCTGTGATGTCATTATCAGATCAATTGAACATGTTCAAAGAATACATAGGAAAATTGAATGATGCAATTGGTGGAAAGAGAACAACAACAATAATATCAAAGAGTATATACATTGTGTGTATAGGAAGTGATGACATTGCAAATACATATTCTCAAACACCATTTAGAAGAGGGTATGATATTCAATCATATACAGATTTAATGGCTTCAGAAGCTTCAAATTTCTTGCAGAAACTTTATGGATTAGGAGCCAGAAAAATAGGAGTATTTAATGTACCTGTAATAGGGTGTGTACCCTCTCAAAGGACAATTGGTGGAGGCATTATGAGAGCATGTTCAGATTTTTCCAACCAAGTAGCAATACTCTTCAATTCAAAGCTTTCATTTCAAATGGAATCACTTCAAACAAAATTATTTGATGCAAAATTTGTCTATCTTGATTCTTACAATCCATTGCTTGATATTCTTCAAAACCCTTCTAAATATGGTTTTGAAGAAGCAGATAGAGGATGTTGTGGCACAGGGAACATAGAAGTTGGTATTTTGTGCAACCCTTACAGCATAAACACATGCTCAAATTCCTCAAACTACATATTTTGGGATAGTTATCATCCTACAGAAAAGACTTATCATGTGCTTAGTTCTCTAGTGCTTGATCACAAAATCAAAGACTTTTCAAATCATATGATGAACCTTTCCAACCTTAAATCTCTTTATGTTTGTCCTCTTCTAGTTATGTTTTTTAATCCATATGTTGTTACATCCATATCAAATGTGAAATCTTCATTTCTTGATGCTATAGCCATAAACTTTACATTTCCTTCTGTTATAGCTTTTGGTGATTCAATCTTGGATACAGGGAACAATAATTATCTTGAAACAATAGTTAAGTCAAATTTCAAACCATATGGAAGAGATTTCTTTGGAGGAAAACCCACTGGAAGGTTTTGCAATGGCAGGGTTCCTTCAGATTTTTTTGCTGAAATACTCGGTGTTAAGGAATCCTTGCCACCATATCTTGATCCAGATTTACAGATTGAAGACCTCTTAACCGGGGTGTGTTTCGCCTCGGCCGGTTCTGGATATGATCCTCTTACAATTGAACGAACAACTGTGTTATCAATTGATGACCAACTAACTATGTTCAAAGAATACATAGCAAAATTGAATGGAGCTGTGGGGGAAGAAAGAACAAGCATGGTTCTAGCAAAAAGCATAATAGTCATTAGCATGGGAAGCAATGACATTTCAGGATCATATTTTCAGTCACCATATAGAAGATGTGTGTTTGATATAGACCAGTATACAAGTATACTAATCAATCAAAATTCCAAATTTGTACAGGAACTTTATGAATTGGGGGCAAGAAAGATTGGAGTTTTGAGCTTGGGACCAGTGGGGTGTGTGCCAATGCAAAGAACTATAGGAGGAGGTACTCAAAGAAAGTGTGTAGTAGAAATAAATGATGCATGTTTGCTCTATAATTCTAAGCTTTATTCTTCAATTATGGCTCTCAATGCAACTTATCAAGATGCTAGAATTGTCTACCTTGATACCTATACTGGATTGAATGCTTTTGTCCAATACCCCAATCTCTTTGGATTTGAAAATGGGAATGGTTCTTGTTGTGGCATTGCAAATGTGGAATTGGGTCCTTTATGTAATTCTTTTGTATTAAAAATGTGTGAAGATGCCTCTAAATATGTCTTCTGGGACAGTTATCACCCTACAGATAGAGCTTATAATCTTCTTACCTCAGATGCCATAAAAAAGACAATTCATCAGTTTATATGA 2211 0.3483 MKSLFQKHVSHKLHLFIILCSTISMIFEYVCGVNLPNNETVPAVIIFGDSIVDSGNNNYIDTLIKCNFPPYGRDFGEGNHPTGRFSNGLVPSDIIAAKFGVKEILPAYLDPDLQIQELLTGVSFASGGAGYDPLTSELVSVMSLSDQLNMFKEYIGKLNDAIGGKRTTTIISKSIYIVCIGSDDIANTYSQTPFRRGYDIQSYTDLMASEASNFLQKLYGLGARKIGVFNVPVIGCVPSQRTIGGGIMRACSDFSNQVAILFNSKLSFQMESLQTKLFDAKFVYLDSYNPLLDILQNPSKYGFEEADRGCCGTGNIEVGILCNPYSINTCSNSSNYIFWDSYHPTEKTYHVLSSLVLDHKIKDFSNHMMNLSNLKSLYVCPLLVMFFNPYVVTSISNVKSSFLDAIAINFTFPSVIAFGDSILDTGNNNYLETIVKSNFKPYGRDFFGGKPTGRFCNGRVPSDFFAEILGVKESLPPYLDPDLQIEDLLTGVCFASAGSGYDPLTIERTTVLSIDDQLTMFKEYIAKLNGAVGEERTSMVLAKSIIVISMGSNDISGSYFQSPYRRCVFDIDQYTSILINQNSKFVQELYELGARKIGVLSLGPVGCVPMQRTIGGGTQRKCVVEINDACLLYNSKLYSSIMALNATYQDARIVYLDTYTGLNAFVQYPNLFGFENGNGSCCGIANVELGPLCNSFVLKMCEDASKYVFWDSYHPTDRAYNLLTSDAIKKTIHQFI* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1247 736 CDD SGNH_plant_lipase_like 42 358 IPR035669 -
Lan17g1247 736 Pfam GDSL-like Lipase/Acylhydrolase 415 724 IPR001087 GO:0016788
Lan17g1247 736 Pfam GDSL-like Lipase/Acylhydrolase 44 355 IPR001087 GO:0016788
Lan17g1247 736 Gene3D SGNH hydrolase 403 733 IPR036514 -
Lan17g1247 736 Gene3D SGNH hydrolase 33 361 IPR036514 -
Lan17g1247 736 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 378 735 - -
Lan17g1247 736 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 364 - -
Lan17g1247 736 PANTHER GDSL ESTERASE/LIPASE EXL3 378 735 - -
Lan17g1247 736 PANTHER GDSL ESTERASE/LIPASE EXL3 4 364 - -
Lan17g1247 736 SUPERFAMILY SGNH hydrolase 43 358 - -
Lan17g1247 736 CDD SGNH_plant_lipase_like 413 723 IPR035669 -
Lan17g1247 736 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 415 426 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1247 Lan-Chr17 20767730 20779278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1247 400 729 Pollen Coat Proteome AT1G75910 40.299 2.00e-73 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1247 - - ahf:112723705 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0102 18 750148 754067 Lan17g1247 17 20767730 20779278 LSH
Lan17g0185 17 1176782 1179419 Lan17g1247 17 20767730 20779278 PCT
Lan17g1247 17 20767730 20779278 Lan17g0185 17 1176782 1179419 PCT